Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0407
(599 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_05_0047 + 8524345-8524414,8524687-8524776,8525004-8525306,852... 34 0.100
06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247 31 0.70
02_05_0695 + 30990070-30990269,30990399-30990459,30990793-309910... 31 0.93
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 30 1.6
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 30 1.6
04_04_1206 + 31727931-31728048,31728492-31728538,31728782-317289... 29 2.2
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970... 29 2.2
01_06_0445 - 29441472-29442152,29442244-29442357,29442959-294431... 29 2.2
12_02_0879 + 23960084-23961551,23961796-23962184 29 3.8
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 29 3.8
02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680... 28 5.0
01_07_0380 + 43181564-43181639,43182053-43182218,43182494-431826... 28 5.0
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 28 5.0
11_06_0710 - 26492093-26493460 28 6.6
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 28 6.6
03_05_0875 - 28434894-28435082,28435173-28435247,28435399-284354... 28 6.6
02_01_0713 - 5332145-5332351,5332675-5332893,5334347-5334559,533... 27 8.7
>10_05_0047 +
8524345-8524414,8524687-8524776,8525004-8525306,
8525413-8525872,8525962-8526043,8526157-8526351
Length = 399
Score = 33.9 bits (74), Expect = 0.100
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 127 EAKERTDHMIEQKRKKLKKE-NRLIETIPEDDPEKKKHAVYVMTMKLFADMERKRQ 291
EA+ D ++K K+KK+ N ++TI E + EKK A M +K + ERKR+
Sbjct: 289 EAEAMADTWEKEKMAKIKKQYNMTMDTIVEWEAEKKAKAKRQMELKEGDNSERKRE 344
>06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247
Length = 974
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +1
Query: 64 SRAWKTLENDDTRKKC-LDIYEEAKE-RTDHMIEQKRKKLKKENRLIETIPEDDPEKKKH 237
+++ K END T K ++ EAK+ R +H IE+ K+ E+ ++D KKKH
Sbjct: 769 AKSTKLKENDSTGKSSEIEDEGEAKQNRLEHSIERA-----KQETATESPKKEDKSKKKH 823
Query: 238 AV--YVMTMKLFA 270
A Y+M + + A
Sbjct: 824 ATRKYLMLLGVLA 836
>02_05_0695 +
30990070-30990269,30990399-30990459,30990793-30991001,
30991295-30991382
Length = 185
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +1
Query: 130 AKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYVMTMKLFADMERKRQHLGSKR 309
AKE+TD + E+ ++ + + + +D+ EK K V +++ F ++ +G KR
Sbjct: 116 AKEKTDEVSEKTKETMHETKEAVVGESDDEKEKFKQRVEEGSLQEFNWPSSNQKGIGKKR 175
Query: 310 HG 315
G
Sbjct: 176 KG 177
>07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +1
Query: 118 IYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYVMTMKLFADMERKRQHL 297
++EE + MI+Q K + R +ET E+ +K V+V + + E+ H
Sbjct: 1213 VHEENTGNLNKMIKQALKTKAQSERAVETSLEE--IQKSVLVFVSLINMCKTHEKVVMHA 1270
Query: 298 GSKRHGGKETKT 333
+ +HGG+ T
Sbjct: 1271 MAVKHGGRFVDT 1282
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 67 RAWKTLENDDTRKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKK 234
RA + + KKC + + E+ ++IE +RKKL +E E + E+KK
Sbjct: 252 RAEEEKQKAAREKKCANSEKSLAEKNKNLIETERKKLTEEKSRAECLFAKLEEQKK 307
>04_04_1206 +
31727931-31728048,31728492-31728538,31728782-31728906,
31729067-31729133,31729221-31729283,31729429-31729498,
31729751-31729770,31729840-31729956,31730046-31730227,
31730586-31730640,31731604-31731697,31731791-31731900,
31733167-31733193,31733510-31733701
Length = 428
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 148 HMIEQKRKKLKKENRLIETIPEDDPEKKKHA 240
H ++++ +K KK+ +E IPE P+K+K A
Sbjct: 387 HALKKRERKDKKKAAEVEKIPEKAPKKQKKA 417
>02_05_0417 - 28796121-28796743,28796829-28796925,28797010-28797093,
28797173-28797234,28797316-28797460,28797542-28797961,
28798041-28798090,28798163-28798349,28798426-28798680,
28798785-28798953,28799044-28799177,28799291-28799446,
28799534-28799719,28799798-28799962,28800074-28800190,
28800553-28800762,28800850-28801049,28801135-28801405,
28801481-28801547,28801644-28801942,28802425-28802991
Length = 1487
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +1
Query: 112 LDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDD---PEKKKHAVYV-MTMKLFADME 279
L+ YE+ K IE + KKL + R I + E D +K+ ++V + K F
Sbjct: 1004 LEFYEKRKRVLLENIELELKKLSNKVRFILAVVEGDIIVNNRKRAELFVELKQKGFDPFP 1063
Query: 280 RKRQHLGSKRHGGKE 324
RK+Q G G E
Sbjct: 1064 RKKQRAGPSAVGAIE 1078
>01_06_0445 -
29441472-29442152,29442244-29442357,29442959-29443186,
29443284-29443586
Length = 441
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 273 HGKEASASWK*ETWRKGNENVRLKLNRRLK-CP*RKNGQRILRNLDRVASRAGRPSSPRV 449
H KEA A W ++VR K++ R + R+ + ++ R ++ GRPSSP V
Sbjct: 172 HVKEAEAGWCDSQGTA--DDVRSKIHMRHEGAIKRERARTYAQSHQRCSNHGGRPSSPAV 229
Query: 450 KIK 458
+K
Sbjct: 230 SLK 232
>12_02_0879 + 23960084-23961551,23961796-23962184
Length = 618
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 378 NGQRILRNLDRVASRAGRPSSPRVKIKRKRKYNR 479
+ Q+I+R LDR AS SS K+ R K+NR
Sbjct: 299 SSQKIVRTLDRKASGTTIESSNGSKVVRATKFNR 332
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 124 EEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKK 234
++ +ER ++ +KR++L+ E ++E ED+ E K+
Sbjct: 668 KKRREREKNLPRKKRRRLEAEREMLEDESEDEEEAKE 704
>02_03_0172 +
15965342-15965711,15967757-15967849,15967976-15968060,
15968749-15968824,15968992-15969120,15969473-15969571,
15969661-15969762,15970257-15970415,15970507-15970602,
15971497-15971647,15971782-15971893,15972004-15972074,
15972548-15972984,15973421-15973492,15973713-15973810,
15974350-15974425,15975512-15975634,15975776-15975844
Length = 805
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 112 LDIYEEAKERTDHMIEQKRKKLKKENRLIETI 207
+DI+ E + R D +E +R KLK+ + I+ +
Sbjct: 761 VDIFTEERARRDQEVENQRTKLKEASSTIQNL 792
>01_07_0380 +
43181564-43181639,43182053-43182218,43182494-43182695,
43182789-43182949,43183079-43183172,43183250-43183462,
43184917-43185135,43185458-43185661
Length = 444
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 6 HPDKNMDDSERAQQAFEIVKSSLE 77
HPDKN+D+ E A+ F + ++ E
Sbjct: 354 HPDKNVDNREEAENMFREIAAAYE 377
>01_06_1713 -
39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 118 IYEEAKERTDHMIEQKRKKLKKENRLI--ETIPEDDPEKKKHAVYVMTMKLFADMERKRQ 291
+YE KE +E+K+ K+ + N+L+ E +P + +K+ Y+ AD++R ++
Sbjct: 173 MYEMKKEAALKTLEKKQNKVDEINKLLDEEILPALEKLRKERCQYMKWANGNADLDRLKR 232
>11_06_0710 - 26492093-26493460
Length = 455
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +1
Query: 79 TLENDDTRKKCLD-IYEEAKERTDH---MIEQKRKKLKKENRLIETIPEDDPEKKK 234
TL DD++ + D I E ++ TD E+K+KK KK+++ + +DD +KK
Sbjct: 104 TLSVDDSQAEPADSIAEPVEDGTDDGEDESEKKKKKKKKKSKSKSSDDDDDDAEKK 159
>05_03_0634 + 16432679-16433076,16433358-16433610,16433993-16434291,
16434553-16434729,16435001-16435621,16435690-16435784,
16436000-16436088,16436185-16436250,16436475-16437026,
16437879-16437953,16438305-16438375,16438456-16438513,
16441506-16442048
Length = 1098
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 375 KNGQRILRNLDRVASRAGRPSSPRVKIKRKRK 470
K +R + +R SR+GRPSS K +RK K
Sbjct: 961 KRSEREGKGHNRDGSRSGRPSSSNAKGERKNK 992
>03_05_0875 -
28434894-28435082,28435173-28435247,28435399-28435490,
28435721-28435835,28436019-28436188,28436237-28436310,
28436397-28436553,28436658-28436730,28436898-28436960,
28437067-28437341,28437710-28437816,28437884-28438788,
28439742-28440032
Length = 861
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 91 DDTRKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYVMTMKLFA 270
DDT+ KC EE K+ + + E +E I ED +++K A Y+ ++
Sbjct: 380 DDTKAKCKRRPEEEKKEPYSKSSSNYVREEDEENYLENI-EDRKQQEKSAHYIDNKEINN 438
Query: 271 DMERKRQHLGSKR 309
D +Q + R
Sbjct: 439 DPAATKQRSNNLR 451
>02_01_0713 -
5332145-5332351,5332675-5332893,5334347-5334559,
5334637-5334730,5334860-5335020,5335114-5335315,
5335619-5335784,5336208-5336286
Length = 446
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 6 HPDKNMDDSERAQQAFEIVKSSLE 77
HPDKN+D E A+ F + ++ E
Sbjct: 355 HPDKNVDKREEAENMFREIAAAYE 378
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,684,529
Number of Sequences: 37544
Number of extensions: 256706
Number of successful extensions: 867
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -