Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0407
(599 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g38823.1 68415.m04770 expressed protein 33 0.19
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 31 0.58
At4g36140.1 68417.m05144 disease resistance protein (TIR-NBS-LRR... 31 0.77
At2g22560.1 68415.m02674 kinase interacting protein-related simi... 31 0.77
At3g28770.1 68416.m03591 expressed protein 30 1.0
At5g02940.1 68418.m00237 expressed protein 30 1.3
At3g05110.1 68416.m00555 hypothetical protein 29 1.8
At1g56110.1 68414.m06443 nucleolar protein Nop56, putative simil... 29 1.8
At3g50320.1 68416.m05503 hypothetical protein 29 2.4
At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2) (T... 29 3.1
At5g56920.1 68418.m07106 expressed protein 29 3.1
At5g49580.1 68418.m06136 DNAJ heat shock N-terminal domain-conta... 29 3.1
At3g53040.1 68416.m05846 late embryogenesis abundant protein, pu... 29 3.1
At2g36740.1 68415.m04507 YL1 nuclear family protein similar to Y... 28 4.1
At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding famil... 28 4.1
At1g56660.1 68414.m06516 expressed protein 28 4.1
At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein... 28 5.4
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 28 5.4
At1g31310.1 68414.m03831 hydroxyproline-rich glycoprotein family... 28 5.4
At1g27580.1 68414.m03361 F-box family protein similar to F-box p... 28 5.4
At1g27540.1 68414.m03357 F-box family protein similar to F-box p... 28 5.4
At5g62390.1 68418.m07830 calmodulin-binding family protein conta... 27 7.2
At4g17970.1 68417.m02675 expressed protein contains Pfam profile... 27 7.2
At3g18020.1 68416.m02290 pentatricopeptide (PPR) repeat-containi... 27 7.2
At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase I... 27 9.5
At4g23800.1 68417.m03422 high mobility group (HMG1/2) family pro... 27 9.5
At4g17585.1 68417.m02629 hypothetical protein 27 9.5
At4g08430.1 68417.m01392 Ulp1 protease family protein similar to... 27 9.5
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 27 9.5
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 27 9.5
At3g05760.1 68416.m00647 expressed protein 27 9.5
>At2g38823.1 68415.m04770 expressed protein
Length = 258
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 76 KTLENDDTRKKCLDIYEEAKERTDHMIEQKRKKL--KKENRLIETIPEDDPEKKKHAVYV 249
K + D RK D+ ++ T H +K +L K +LI + + D E+K+H V
Sbjct: 139 KKMPRSDRRKAAHDLLKDVCNPTSHDSLRKSVELEIKALKKLIREL-QKDWEEKQH-VKQ 196
Query: 250 MTMKLFADMERKRQHLGSKR 309
T + D+E+K +HL K+
Sbjct: 197 YTKNKYKDLEQKVKHLEKKK 216
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 100 RKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKK 234
+KK D EE +E ++K+KK K+ +IE + EKKK
Sbjct: 478 KKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEEVASPKSEKKK 522
>At4g36140.1 68417.m05144 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1607
Score = 30.7 bits (66), Expect = 0.77
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 387 RILRNLDRVASRAGRPSSPRVKIKRKR 467
+IL+ L RV S RPS PR K+ +KR
Sbjct: 658 KILKELPRVCSSITRPSLPRDKLSKKR 684
>At2g22560.1 68415.m02674 kinase interacting protein-related similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]; weak similarity to Myosin II heavy chain,
non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
Length = 891
Score = 30.7 bits (66), Expect = 0.77
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1
Query: 103 KKCLDIYEEAKERTDHMIEQKR----KKLKKENRLIETIPEDD--PEKKKHAVYVMTMKL 264
K+ LDI EE KE E+K+ K +K E TI ED P V T K+
Sbjct: 426 KRTLDISEEIKEHQKETGEEKKEAPVKSVKFEQTRNATIAEDSTIPSTNPDTVLESTEKV 485
Query: 265 FADMERK 285
+D+E++
Sbjct: 486 DSDLEKQ 492
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.3 bits (65), Expect = 1.0
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +1
Query: 64 SRAWKTLENDDTRKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAV 243
S+ K D KK + +E KE +H ++K K + E+ ED EKKKH
Sbjct: 1048 SKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEE 1107
Query: 244 YVMTMKL--FADMERKRQHLGSKRHGGKETK 330
K DME+ +K+ K K
Sbjct: 1108 SKSRKKEEDKKDMEKLEDQNSNKKKEDKNEK 1138
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +1
Query: 76 KTLENDDTRKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYVMT 255
K E+ ++ + YEE K +T E K++K K +++ E ++ + KK
Sbjct: 1000 KESEDSASKNREKKEYEEKKSKTKE--EAKKEKKKSQDKKREEKDSEERKSKKEKEESRD 1057
Query: 256 MKLFADMERKRQHLGSKRHGGKE 324
+K E ++ S+ H K+
Sbjct: 1058 LKAKKKEEETKEKKESENHKSKK 1080
>At5g02940.1 68418.m00237 expressed protein
Length = 813
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 85 ENDDTRKKCLDIYEEAKERTDHMIEQKRKKLKK 183
E DDTRK+ +YEE K R + +I + K L K
Sbjct: 512 ETDDTRKQ---VYEEKKSRLEKIITRPSKSLSK 541
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +1
Query: 91 DDTRKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYVMTMKLFA 270
D +R++ D+ + KE + I + ++++KE LIET + ++ V + F
Sbjct: 27 DQSRERVSDLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFF 86
Query: 271 DMERK 285
D++ K
Sbjct: 87 DLKEK 91
>At1g56110.1 68414.m06443 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 522
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 124 EEAKERTDHMIEQ-KRKKLKKENRLIETIPEDDPEKKKHAVYVMTMKLFADMERKRQHLG 300
EE KE D +++ K+KK K E E+D +KK M+ + E+ +
Sbjct: 435 EEGKEPVDASVKKSKKKKAKGEEEEEVVAMEEDKSEKKKKKEKRKMETAEENEKSEKKKT 494
Query: 301 SKRHGGKETKT 333
K G E +T
Sbjct: 495 KKSKAGGEEET 505
>At3g50320.1 68416.m05503 hypothetical protein
Length = 144
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 372 RKNGQRILRNLDRVASRAGRPSSPRVKIKRKRKYNRSNLLNRNQRADNYSNR 527
R G+ +L NL R G S RV R NRS++ NRN+ N+ R
Sbjct: 53 RDKGEHLLNNLGRDNDEGGL--SLRVGGMGGRDVNRSSVKNRNKLQTNHDQR 102
>At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2)
(TITAN3) very strong similarity to SMC2-like condensin
(TITAN3) [Arabidopsis thaliana] GI:14279543; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1175
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 118 IYEEAKERTDHMIEQKRKKLKKENRLI--ETIPEDDPEKKKHAVYVMTMKLFADMERKRQ 291
+YE KE +E+K+ K+ + N+L+ E +P + +K+ + Y+ A+++R R+
Sbjct: 173 MYENKKEAALKTLEKKQTKVDEINKLLDHEILPALEKLRKEKSQYMQWANGNAELDRLRR 232
>At5g56920.1 68418.m07106 expressed protein
Length = 227
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = +1
Query: 73 WKTLENDDTRKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYVM 252
W T E+D+ ++ L + + ++ I+ ++ +R ++ P + E+K +AV +
Sbjct: 38 WGTAEDDEYLRQYLLFHYQFQKTQGFSIKWEQFDYNFRSRSMDKSPNEISERKSNAVLIR 97
Query: 253 TMKLFADMERKRQHLGSK 306
M L A + H G+K
Sbjct: 98 EMTLTAIDKHNEAH-GTK 114
>At5g49580.1 68418.m06136 DNAJ heat shock N-terminal
domain-containing protein contains similarity to S-locus
protein 5 GI:6069485 from [Brassica rapa]; contains Pfam
profile PF00226 DnaJ domain
Length = 695
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 3 VHPDKNMDDSERAQQAFEIVKSSLE 77
VHPDKNM +ERA +AF+ ++++ E
Sbjct: 437 VHPDKNM-GNERAAEAFKKLQNAYE 460
>At3g53040.1 68416.m05846 late embryogenesis abundant protein,
putative / LEA protein, putative similar to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 479
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/49 (28%), Positives = 30/49 (61%)
Frame = +1
Query: 85 ENDDTRKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKK 231
+ ++T++K ++ + AKE+ D E+ R+K+ +E RL ++D +K
Sbjct: 313 KTEETKQKAVETKDTAKEKMDEAGEEARRKM-EEMRLEGKKLDEDASRK 360
>At2g36740.1 68415.m04507 YL1 nuclear family protein similar to YL-1
protein (Transcription factor-like 1)
(Swiss-Prot:Q15906) [Homo sapiens]
Length = 379
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +1
Query: 88 NDDTRKKCLDI-YEEAKERTDHMIEQKRKKLKK--ENRLIETIPEDDPEKKKHAVYVMTM 258
NDD CL I Y KE + K+L+ + RLI +KKK V +
Sbjct: 68 NDDVFMSCLCIEYLFIKEPEPDAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVVSQL 127
Query: 259 KLFADMERKRQHLGSKRHGGKE 324
+ E+ + LG+K KE
Sbjct: 128 EYIPGDEKPGEELGNKEQEEKE 149
>At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to SP|O14647
Chromodomain-helicase-DNA-binding protein 2 (CHD-2)
{Homo sapiens}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00385: 'chromo' (CHRromatin
Organization MOdifier)
Length = 1722
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 85 ENDDTRKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKH 237
E D K Y+EA D+ + +KL EN E+D E KH
Sbjct: 112 EGSDPAKDSQSGYKEAYHSEDNHSNDRSEKLDSENENDNENEEEDNEMNKH 162
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 85 ENDDTRKKCLDIYEEAKERTDHMIEQK-RKKLKKENRLIETIPEDDPEKKKHAVYVMTMK 261
E DDT +K E + ++K +KK KK++ + ED+ EKK + V
Sbjct: 407 EEDDTEEKKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMTEDEEEKKDDSKDVKIEG 466
Query: 262 LFADMERKRQHLGSKRHG 315
A E+K + + K+ G
Sbjct: 467 SKAKEEKKDKDVKKKKGG 484
>At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 551
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 136 ERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKH 237
+ T H K KK KK+ E P+ P K+KH
Sbjct: 402 DSTPHESNGKTKKKKKKKTHKEEQPQTSPRKRKH 435
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 KKCLDIYEEAKERTDHMI-EQKRKKLKKENRLIETIPEDDPEKKK 234
K+ + EE KE+ + E+++KK +KE + ++ E + +KKK
Sbjct: 451 KRLVKTLEEEKEKARKLAEEEEKKKAEKEAKKMKKAEEAEEKKKK 495
>At1g31310.1 68414.m03831 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 383
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 73 WKTLENDDTRKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIET 204
WK +E+ RK C+ + ++ D+++ +K + E R +E+
Sbjct: 64 WKWIEDYCWRKGCMRSQNQCNDKWDNLMRDYKKVREYERRRVES 107
>At1g27580.1 68414.m03361 F-box family protein similar to F-box
protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]; confirmed by FLcDNA GI:16604421; contains
uncharacterized Arabidoppsis domain shared by 33
Arabidopsis proteins;simlar to unknown protein
GB:AAC63676
Length = 364
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 225 LWIIFRNGFY*AVFLFQLFPFL 160
LW+ +NG Y V+ F+++PFL
Sbjct: 125 LWVDDKNGNYVVVWQFEMYPFL 146
>At1g27540.1 68414.m03357 F-box family protein similar to F-box
protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]; confirmed by FLcDNA GI:16604421; contains
uncharacterized Arabidoppsis domain shared by 33
Arabidopsis proteins
Length = 413
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 225 LWIIFRNGFY*AVFLFQLFPFL 160
LW+ +NG Y V+ F+++PFL
Sbjct: 174 LWVDDKNGNYVVVWQFEMYPFL 195
>At5g62390.1 68418.m07830 calmodulin-binding family protein contains
IQ calmodulin-binding motif, Pfam:PF00612
Length = 446
Score = 27.5 bits (58), Expect = 7.2
Identities = 29/112 (25%), Positives = 53/112 (47%)
Frame = +1
Query: 127 EAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYVMTMKLFADMERKRQHLGSK 306
E KE+ + + + +KK K +IE E+D E +H V+ K F+ R+ + +K
Sbjct: 239 EEKEKKEKIETKSKKKEKTRVVVIEEEEEEDDESSEHGAIVL-RKAFS---RRNGAVRTK 294
Query: 307 RHGGKETKT*G*N*TGDSSVLRERMGKEF*GISTESRRELEDLPVHE*R*KE 462
+ KE ++V+ +R K + ++S R L DL + + + KE
Sbjct: 295 KGKNKEMP------PEYAAVMIQRAFKAYLIRRSKSLRALRDLAIAKTKLKE 340
>At4g17970.1 68417.m02675 expressed protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 560
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 124 EEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYV 249
EE +T M+ + +K+KK + + + ++DP + HA+ V
Sbjct: 13 EEGLSKTKWMVLEPSEKIKKIPKRLWNVGKEDPRRVIHALKV 54
>At3g18020.1 68416.m02290 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 688
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1
Query: 83 NVFQARLHYFKSLLSTLRVIHILI 12
NV ARL Y +S +STL VIH LI
Sbjct: 129 NVIIARLLYSRSPVSTLGVIHRLI 152
>At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase IV
GI:9651815 from [Arabidopsis thaliana]; identical to cDNA
DNA ligase IV, GI:9651814
Length = 1219
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/82 (20%), Positives = 39/82 (47%)
Frame = +1
Query: 70 AWKTLENDDTRKKCLDIYEEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYV 249
A +++EN++TR+ + Y E+++R D+ + + N E ++ + + +
Sbjct: 1080 AGRSVENEETREPDIAKYTESQQR-DNTVAVEEALQDSRNAKTEMDMKEKLQIHEDPLQA 1138
Query: 250 MTMKLFADMERKRQHLGSKRHG 315
M MK+F +K ++ G
Sbjct: 1139 MLMKMFPIPSQKTTETSNRTTG 1160
>At4g23800.1 68417.m03422 high mobility group (HMG1/2) family
protein similar to HMG2B [Homo sapiens] GI:32335;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 456
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/52 (30%), Positives = 31/52 (59%)
Frame = +1
Query: 133 KERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYVMTMKLFADMERKR 288
KE+TD++I++++ KK+N E + + P+K + + LF+ ERK+
Sbjct: 353 KEKTDNLIKKEKATKKKKN---ENVDPNKPKKPASSYF-----LFSKDERKK 396
>At4g17585.1 68417.m02629 hypothetical protein
Length = 152
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 124 EEAKERTDHMIEQKRKKLKKENRLIETIPEDDPEKKKHAVYV 249
EE +T M+ + +K+KK + + ++ ++DP + HA V
Sbjct: 13 EEGLSKTKWMVLEPSEKIKKIPKRLWSVGKEDPRRVIHAFKV 54
>At4g08430.1 68417.m01392 Ulp1 protease family protein similar to
At5g45570, At5g28235; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 808
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 154 IEQKRKKLKKENRLIETIPEDDPEKKKHAVYVMTMKLFAD 273
+E+ + ++KK +E + PEKKK +V T K F D
Sbjct: 390 VEKPKPEMKKTAVKVEKVDSPKPEKKK-SVVAPTTKTFDD 428
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 405 DRVASRAGRPSSPRVKIKRKRKYNRSNLLNRNQRADNYS 521
DR A + S +IKRKR+Y+ S+ + + +D+ S
Sbjct: 205 DREAKETRKKESNEKRIKRKRRYSSSDSYSSSSDSDSDS 243
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 405 DRVASRAGRPSSPRVKIKRKRKYNRSNLLNRNQRADNYS 521
DR A + S +IKRKR+Y+ S+ + + +D+ S
Sbjct: 205 DREAKETRKKESNEKRIKRKRRYSSSDSYSSSSDSDSDS 243
>At3g05760.1 68416.m00647 expressed protein
Length = 202
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 133 KERTDHMIEQKR--KKLKKENRLIETIPEDDPE 225
+E + + Q+R KK KK+ +++E PE DPE
Sbjct: 154 QEEEEELKRQRREKKKEKKKGKVVEEEPEMDPE 186
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,647,725
Number of Sequences: 28952
Number of extensions: 231511
Number of successful extensions: 994
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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