Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0406
(519 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55041| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09) 29 1.7
SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_50198| Best HMM Match : Frizzled (HMM E-Value=0) 28 4.0
SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_31286| Best HMM Match : HEAT (HMM E-Value=0.092) 28 4.0
SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_11081| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_57716| Best HMM Match : Phage_fiber_2 (HMM E-Value=4.3) 27 7.0
SB_51020| Best HMM Match : BDV_P10 (HMM E-Value=1.9) 27 7.0
SB_21994| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_35073| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_33611| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 27 9.3
>SB_55041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 96 ILIXGRIETVTKKKKKNRDSLSLVPNSCSPGD 1
IL+ G + KKK K + NSCSPGD
Sbjct: 24 ILLTGWYSHIQKKKLKASKKNFFISNSCSPGD 55
>SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09)
Length = 438
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = -3
Query: 388 SSSDERTTPLVDVKKENEGPTYASARKPEAQALKEHNNCILITDSTTVSDGAKAVKRRYS 209
S++D R+ + ++ + S K + K ++N + +TD G +KR+Y
Sbjct: 46 STNDLRSRENLSKSRDKLYRSSESLHKSKESMHKSNDNVVDLTDGMVDDFGDFTLKRKYK 105
Query: 208 RPKLEIDMKDSQLEDVCK-TNGI-GEHVKLQKRRKVSGDHTDTRQDRNCNXXXXXKPRQS 35
+P + +Q+ D+ K G+ G H +++ SG+ + + N S
Sbjct: 106 KPAK--NSSTNQMSDIDKFAPGVTGRHAVNFQKKSPSGNINTRKPYKTGNIHLSGNDSDS 163
Query: 34 LP 29
+P
Sbjct: 164 IP 165
>SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 99 IILIXGRIETVTKKKKKNRDSLSLVPNSCSPGD 1
+ L G + V ++ S+SL+ NSCSPGD
Sbjct: 10 LTLTKGNRKLVPGPPSRSTVSISLISNSCSPGD 42
>SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 99 IILIXGRIETVTKKKKKNRDSLSLVPNSCSPGD 1
+ L G V ++ S+SL+ NSCSPGD
Sbjct: 10 LTLTKGNKSLVPGPPSRSTVSISLISNSCSPGD 42
>SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 99 IILIXGRIETVTKKKKKNRDSLSLVPNSCSPGD 1
+ L G V ++ S+SL+ NSCSPGD
Sbjct: 10 LTLTKGNKTLVPGPPSRSTVSISLISNSCSPGD 42
>SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1652
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 89 ISMITRHFPSFL*FDVFSNSICFTYVFKLRVFHIYFKLWSRIPAFHCLCSIRNCC 253
++ +T FP L VF+ S+C +R F KL RIP + +R CC
Sbjct: 133 VAAVTVTFPLRL-CSVFAWSVCAILRVAVRTFIFGLKLPYRIPRLIIVILVRVCC 186
>SB_50198| Best HMM Match : Frizzled (HMM E-Value=0)
Length = 654
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 10/53 (18%)
Frame = -1
Query: 162 YVKQMELENTSNYKNEGKCLVII-----LIXG-----RIETVTKKKKKNRDSL 34
YV M+ EN +NY CL ++ L+ G RI TV K K+ N D L
Sbjct: 429 YVGNMDYENLANYVLTPLCLYLLVGTFFLLAGFVSLFRIRTVLKNKETNTDKL 481
>SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 99 IILIXGRIETVTKKKKKNRDSLSLVPNSCSPGD 1
+ L G V ++ S+SL+ NSCSPGD
Sbjct: 10 LTLTKGNKTLVPGPPSRSTVSISLISNSCSPGD 42
>SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 99 IILIXGRIETVTKKKKKNRDSLSLVPNSCSPGD 1
+ L G V ++ S+SL+ NSCSPGD
Sbjct: 10 LTLTKGNKTLVPGPPSRSTVSISLISNSCSPGD 42
>SB_31286| Best HMM Match : HEAT (HMM E-Value=0.092)
Length = 1270
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = +3
Query: 207 LEYLRFTAFAPSETVVESVIRIQLLCSFKACASGLRADAYVGPSFSFLTSTNGVVLSSED 386
LEYL T SET+ E V + + A A+G +D+Y G S + G +
Sbjct: 200 LEYLSATVQIASETIEEEVFFETVTANTNASANG--SDSYQGDLDSEGLANQGDGQTDSA 257
Query: 387 DKSIGPQTGG 416
D + GG
Sbjct: 258 DSGVASMRGG 267
>SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 99 IILIXGRIETVTKKKKKNRDSLSLVPNSCSPGD 1
+ L G + V ++ S+SL+ NSCSPGD
Sbjct: 10 LTLTKGIQKLVPGPPSRSTVSISLISNSCSPGD 42
>SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 99 IILIXGRIETVTKKKKKNRDSLSLVPNSCSPGD 1
+ L G V ++ S+SL+ NSCSPGD
Sbjct: 10 LTLTKGNKMLVPGPPSRSTVSISLISNSCSPGD 42
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -3
Query: 403 GPIDLSSSDERTTPLVDVKKENEGP---TYASARKPEAQALKEHNNCILITDS-TTVSDG 236
GP+ LSS +T+ V + + GP T + KPEA+ K ++ +DS ++VS G
Sbjct: 1084 GPVSLSS---KTSGPVSLTSKTPGPVSLTTKQSTKPEAKKHKRRSSTPERSDSDSSVSSG 1140
Query: 235 AKAVKRRYSRPKLEI 191
+RR E+
Sbjct: 1141 PSKKQRRGRESPTEV 1155
>SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 99 IILIXGRIETVTKKKKKNRDSLSLVPNSCSPGD 1
+ L G V ++ S+SL+ NSCSPGD
Sbjct: 8 LTLTKGNKMLVPGPPSRSTVSISLISNSCSPGD 40
>SB_11081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 135 TSNYKNEGKCLVIILIXGRIETVTKK-KKKNRDSLSLVPNSCSPGD 1
T ++++ +C+ I T K KKKN + NSCSPGD
Sbjct: 65 TEQHEDKQECIHSIGAYRTTRRQTSKVKKKNAVTRIRTSNSCSPGD 110
>SB_57716| Best HMM Match : Phage_fiber_2 (HMM E-Value=4.3)
Length = 189
Score = 27.5 bits (58), Expect = 7.0
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = -3
Query: 328 TYASARKPEAQALKEHNNCIL--ITDSTTVSDG--------AKAVKRRYSRPKLEIDMKD 179
T A ++KP + K +CI +T S++ SD AKA+KR + ++E K+
Sbjct: 107 TVAESKKPLLKN-KNRRSCIAAPVTPSSSTSDNSKDTRLAAAKAMKRSINTAEMEKAQKN 165
Query: 178 SQLEDVCKTNGIGEHVKLQKRR 113
+ V ++ G+ QKRR
Sbjct: 166 KRRSCVVESTTTGKTGSKQKRR 187
>SB_51020| Best HMM Match : BDV_P10 (HMM E-Value=1.9)
Length = 576
Score = 27.5 bits (58), Expect = 7.0
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = -3
Query: 328 TYASARKPEAQALKEHNNCIL--ITDSTTVSDG--------AKAVKRRYSRPKLEIDMKD 179
T A ++KP + K +CI +T S++ SD AKA+KR + ++E K+
Sbjct: 458 TVAESKKPLLKN-KNRRSCIAAPVTTSSSTSDNSKDTRLAAAKAMKRSINTAEMEKAQKN 516
Query: 178 SQLEDVCKTNGIGEHVKLQKRR 113
+ V ++ G+ QKRR
Sbjct: 517 KRRSCVVESTTTGKTGSKQKRR 538
>SB_21994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 39 SLSLVPNSCSPGD 1
S+SL+ NSCSPGD
Sbjct: 31 SISLISNSCSPGD 43
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = -3
Query: 331 PTYASARKPEAQALKEHNNCILITDSTTVSDGAKAVKRRYSRPKLEIDMKDSQLEDV 161
P+Y + E N + + + T+ D + + RR+ P ++ DMK E V
Sbjct: 39 PSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVV 95
>SB_35073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 364 VLFFHLKMINLLGHKLVGKSPLRRRQ 441
VLF L ++NL G+ LV + LR RQ
Sbjct: 26 VLFSILALVNLTGNSLVARIILRHRQ 51
>SB_33611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 249 VVESVIRIQLLCSFKACASGLRADAYVGPSFSFLTSTNGVVLSSEDDKSIGP 404
V+++++R L CS CAS + SFS TST +S + + P
Sbjct: 3 VIKAIVR--LACSMITCASSTASTLNTHASFSAATSTAPESISQTAKQRLSP 52
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = -3
Query: 187 MKDSQLEDVCKTNGIGEHVKLQKRRKVSG----DHTD 89
+K LEDV KT+ GE++K K G DHT+
Sbjct: 616 LKQLDLEDVLKTSSGGENLKCAGNAKYGGENEADHTE 652
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,903,435
Number of Sequences: 59808
Number of extensions: 284360
Number of successful extensions: 1657
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1656
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1160542895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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