Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0406
         (519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical ...    34   0.070
AF067217-3|AAF99975.3|  479|Caenorhabditis elegans Hypothetical ...    33   0.16 
AL021346-3|CAI79189.1|  175|Caenorhabditis elegans Hypothetical ...    31   0.37 
Z49889-6|CAA90069.2|  435|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z49887-7|CAA90060.2|  435|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    27   6.1  
AF038623-8|AAB94160.2|  631|Caenorhabditis elegans Hypothetical ...    27   6.1  
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog...    27   8.0  
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro...    27   8.0  

>AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical
           protein W09G12.7 protein.
          Length = 368

 Score = 33.9 bits (74), Expect = 0.070
 Identities = 26/103 (25%), Positives = 46/103 (44%)
 Frame = -3

Query: 385 SSDERTTPLVDVKKENEGPTYASARKPEAQALKEHNNCILITDSTTVSDGAKAVKRRYSR 206
           SSD+    +V VKK+ +G     ++KP+ +     ++      S +  D  K+ K++   
Sbjct: 47  SSDDEVVVVV-VKKDQKGKRGKKSKKPKKKQESSDDSSDNSDSSESSDDDKKSKKKKKKS 105

Query: 205 PKLEIDMKDSQLEDVCKTNGIGEHVKLQKRRKVSGDHTDTRQD 77
            K   D  DS   D   ++  G+  K +K +K S D +    D
Sbjct: 106 KKDSSDSSDS--SDSSDSSDDGKKKKKKKSKKDSSDDSSDSSD 146


>AF067217-3|AAF99975.3|  479|Caenorhabditis elegans Hypothetical
           protein F56A6.4 protein.
          Length = 479

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -1

Query: 144 LENTSNYKNEGKCLVIILIXGRIETVTKKKKKNRDSLSL 28
           +E  S ++N G+C ++I+  GR E + KKKK +  SL +
Sbjct: 288 IEQKSGFQNGGRCTMLIVSFGRAE-IAKKKKLHNLSLQI 325


>AL021346-3|CAI79189.1|  175|Caenorhabditis elegans Hypothetical
           protein H37A05.4 protein.
          Length = 175

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 172 LEDVCKTNGIGEHVKLQKRRK-VSGDHTDTRQDR 74
           L D+C  NGIG H+K Q   K V+ ++ +T+Q R
Sbjct: 21  LSDLCSPNGIGHHLKKQLLFKTVATNYINTKQQR 54


>Z49889-6|CAA90069.2|  435|Caenorhabditis elegans Hypothetical
           protein T06H11.4 protein.
          Length = 435

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -3

Query: 298 QALKEHNNCILITDSTTVSDGAKAVKRRYSRPKLEIDMKDSQLEDVCK-TNGIGEHVKL 125
           Q   E   C+ I+    + +GA AV  R     +  D +  + E +CK    +GE+++L
Sbjct: 93  QGAVEIGKCVRISTGGIIPEGADAVIMREYTELVRQDQQSEETEIICKQAVQVGENIRL 151


>Z49887-7|CAA90060.2|  435|Caenorhabditis elegans Hypothetical
           protein T06H11.4 protein.
          Length = 435

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -3

Query: 298 QALKEHNNCILITDSTTVSDGAKAVKRRYSRPKLEIDMKDSQLEDVCK-TNGIGEHVKL 125
           Q   E   C+ I+    + +GA AV  R     +  D +  + E +CK    +GE+++L
Sbjct: 93  QGAVEIGKCVRISTGGIIPEGADAVIMREYTELVRQDQQSEETEIICKQAVQVGENIRL 151


>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
           protein H05G16.1 protein.
          Length = 1111

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +1

Query: 268 GYSCCVLLRLVPQVCELMHM*ALHFLF*HRPMVLFFHLKMINLLGHKLVGKSPL 429
           G   C+ +R++     + H+  + F F     V+ FH   + LL HK +G++ L
Sbjct: 22  GRLVCIKVRMLDDTVAVFHLGVICFFF----CVVSFHGTYVFLLQHKAIGQTLL 71


>AF038623-8|AAB94160.2|  631|Caenorhabditis elegans Hypothetical
           protein T08B6.4 protein.
          Length = 631

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 84  GRIETVTKKKKKNRDSLSLVPNSCS 10
           G++  VT KK   R +L+L PN CS
Sbjct: 287 GKVVKVTMKKSAYRIALALDPNQCS 311


>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
           domain protein 1 protein.
          Length = 1346

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = -3

Query: 220 RRYSRPKLEIDMKDSQLEDVCKTNGIGEHVKLQKRRKVSGDH 95
           R Y R   E D +    EDV K     +  K Q RR   G H
Sbjct: 324 RLYERELKEEDERGDNDEDVVKMRSSADTFKNQSRRSSQGSH 365


>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
           protein.
          Length = 1346

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = -3

Query: 220 RRYSRPKLEIDMKDSQLEDVCKTNGIGEHVKLQKRRKVSGDH 95
           R Y R   E D +    EDV K     +  K Q RR   G H
Sbjct: 324 RLYERELKEEDERGDNDEDVVKMRSSADTFKNQSRRSSQGSH 365


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,018,004
Number of Sequences: 27780
Number of extensions: 218683
Number of successful extensions: 623
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)