Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0406
         (519 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    26   0.27 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   3.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   3.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   3.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   3.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.3  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 164 VFKLRVF-HIYFKLWSRIPAFHCLCSIRNCCGV 259
           VFK+ +F  ++  +W  +  + C  SI N C +
Sbjct: 127 VFKVWIFGDLWCSIWLAVDVWMCTASILNLCAI 159


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179 VFHIYF-KLWSRIPAFHCLCSIRNCCGV 259
           +F I+  KLW       C  SI N C +
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAI 130


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179 VFHIYF-KLWSRIPAFHCLCSIRNCCGV 259
           +F I+  KLW       C  SI N C +
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAI 130


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 69   VTKKKKKNRDSLSLVPNSCSPG 4
            V + KKKN+   + V N+  PG
Sbjct: 1495 VVEHKKKNQQEWNQVSNNVKPG 1516


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = +2

Query: 179 VFHIYF-KLWSRIPAFHCLCSIRNCCGV 259
           +F I+  KLW       C  SI N C +
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAI 130


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 280 CVLLRLVPQVC 312
           C + R++PQVC
Sbjct: 232 CTITRVIPQVC 242


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 280 CVLLRLVPQVC 312
           C + R++PQVC
Sbjct: 232 CTITRVIPQVC 242


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,716
Number of Sequences: 438
Number of extensions: 2536
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)