Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0405
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q55EH0 Cluster: Putative uncharacterized protein; n=2; ...    36   0.43 
UniRef50_Q1E334 Cluster: Putative uncharacterized protein; n=4; ...    33   3.0  
UniRef50_Q7SDZ6 Cluster: Putative uncharacterized protein NCU019...    33   4.0  

>UniRef50_Q55EH0 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 1439

 Score = 36.3 bits (80), Expect = 0.43
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +2

Query: 74  VSVVMNYQFIHVSCPFPVQSSKKL*RLTAIFGPNLYSLNFNFRLNQFCITTSIE-LSFRI 250
           +  V NY    ++CP  V   K+   L     P + SL+ NF  + +C   ++E L+  I
Sbjct: 91  IDSVNNYSIFSINCPLTVNIPKQFKFLGNTLNPQVNSLSKNFSTDLYCQDFNVEGLNLDI 150

Query: 251 DNSS 262
           +NSS
Sbjct: 151 NNSS 154


>UniRef50_Q1E334 Cluster: Putative uncharacterized protein; n=4;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Coccidioides immitis
          Length = 647

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +2

Query: 26  VNTLILFNIILDTVFGVSVVMNYQFIHVSCPFPVQSSKKL*RLTAI 163
           VN+ I   +IL  +FG S+  ++ FI+ S PFPV  +  L  L ++
Sbjct: 257 VNSAIHALMILQFIFGTSLAASHLFIYYSIPFPVPHAVALRPLASV 302


>UniRef50_Q7SDZ6 Cluster: Putative uncharacterized protein
           NCU01940.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU01940.1 - Neurospora crassa
          Length = 713

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 255 THHGIFINLVIYCLRSRLSDCEYKELYCISSPREALKLSLRRQAKLIENYL 407
           THHG++ +++ YC    L     K+ Y +S  RE  +L L +Q     NYL
Sbjct: 420 THHGLYSHVMEYCSEGDLFSLVQKK-YLMSEDREKDRLCLFKQLVQAVNYL 469


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 470,513,235
Number of Sequences: 1657284
Number of extensions: 8093593
Number of successful extensions: 16959
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16957
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)