Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0405
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10986-12|AAA28011.1|  197|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z81549-8|CAB04469.1|  285|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z74476-5|CAA98965.1|  325|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z70271-1|CAB61041.1|  393|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF103732-1|AAD03603.1|  393|Caenorhabditis elegans Wnt homolog p...    27   8.1  

>L10986-12|AAA28011.1|  197|Caenorhabditis elegans Hypothetical
           protein F10E9.1 protein.
          Length = 197

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 155 TAIFGPNLYSLNFNFRLNQFCIT-TSIELSFRIDNSSWHIY*FGYLLS 295
           TA+  P    LNF+ R +Q C    S+   + I  S+W I   GY+ S
Sbjct: 12  TAVRKPLQKQLNFSLRFHQICYAWISVSTIWYIFFSAWFIRAAGYIFS 59


>Z81549-8|CAB04469.1|  285|Caenorhabditis elegans Hypothetical
           protein F55C9.10 protein.
          Length = 285

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -1

Query: 398 LNKLSLPPETQLQCLSRATYTIQLFVLAIAQSTSQTINNQINKYAMMSCRCENL 237
           LN L +P  T L+C+S   +  +LF    + S   T+ +     +M+S  C+NL
Sbjct: 122 LNDLEIP-RTTLECVSTNVWLHKLFNKVSSGSLEITLPDFKGYRSMLSSHCQNL 174


>Z74476-5|CAA98965.1|  325|Caenorhabditis elegans Hypothetical
           protein W05B10.5 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 149 RLTAIFGPNLYSLNFNFRLNQFCITTSIELSF 244
           R+ A+F P++YS N+ +  + F I   + L+F
Sbjct: 117 RIFAVFFPHVYSRNYRYAPSSFGILICLTLAF 148


>Z70271-1|CAB61041.1|  393|Caenorhabditis elegans Hypothetical
           protein W08D2.1 protein.
          Length = 393

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 115 TRNMNKLIIHHHRY-SKDSIKNNVKKN*RIHLVPNSC 8
           T+N+  L+  H+ +  +++I  N+++  R H V  SC
Sbjct: 221 TKNVAHLVRRHNNFVGREAIAQNIRRQCRCHGVSGSC 257


>AF103732-1|AAD03603.1|  393|Caenorhabditis elegans Wnt homolog
           protein.
          Length = 393

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 115 TRNMNKLIIHHHRY-SKDSIKNNVKKN*RIHLVPNSC 8
           T+N+  L+  H+ +  +++I  N+++  R H V  SC
Sbjct: 221 TKNVAHLVRRHNNFVGREAIAQNIRRQCRCHGVSGSC 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,015,902
Number of Sequences: 27780
Number of extensions: 199698
Number of successful extensions: 476
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)