Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0404
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   3.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.9  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 532 SGGWDGHIRIFSWFSMRPLV 473
           + GW    R+F+ F  +PL+
Sbjct: 310 TAGWSATSRVFATFYNKPLI 329



 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 430 STEKVSLWKAYIMAAGGLDGAI 365
           ST+ +S W   ++A  G+D +I
Sbjct: 262 STQSLSRWIKMVLAESGVDTSI 283


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 13/54 (24%), Positives = 29/54 (53%)
 Frame = +1

Query: 76  GVKITGKYEFLSFVNFLA*HLHSSATLHQHNIMPLHKFVHNMRSKFIMLSKNII 237
           GV++   Y   SF  ++    +++  L  H+++P+ +F  ++   F  + KN+I
Sbjct: 140 GVRMFQYYIGRSFTYYVC---NTTIFLIFHSVLPIKRFFTSLGIAFDNIMKNLI 190


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -1

Query: 324 HIMLYCDLQVMIC--HSLCQFCLYTSTNALIDYIFGQHY 214
           H++ YC L +++C  +    F L+T    L+  I+  +Y
Sbjct: 225 HLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYY 263



 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -1

Query: 324 HIMLYCDLQVMICHSLCQFCLYTSTNALIDYIFGQHYKLRSHIMY 190
           H++  C   +   H L   C+Y    ALI  +   +Y  R+ I++
Sbjct: 265 HLLFCCAFIIFTMHLLFLLCIYYFYCALI-ILLCIYYFCRAFIIF 308


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 494 P*KYTNVSIPASAREYFTITP 556
           P KY +  + A ARE  T+ P
Sbjct: 150 PDKYVDSKVFAKAREEATVVP 170


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 379 DLQLPLYKLSKVKLF 423
           D+  P +KLSK++ F
Sbjct: 30  DINTPSFKLSKIRSF 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,299
Number of Sequences: 336
Number of extensions: 3031
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)