Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0404
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical ... 36 0.017
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 34 0.067
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 34 0.089
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.12
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 31 0.48
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 31 0.48
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL132904-21|CAE54912.1| 133|Caenorhabditis elegans Hypothetical... 29 1.9
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 3.3
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 3.3
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 28 4.4
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical pr... 28 5.9
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 28 5.9
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 28 5.9
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 28 5.9
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 28 5.9
AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical... 28 5.9
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical... 28 5.9
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 27 7.7
>AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical
protein C10B5.1 protein.
Length = 311
Score = 36.3 bits (80), Expect = 0.017
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -3
Query: 577 GINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTE-HKQAIQDVAYSTEKVSLWKA 401
G + + + K +G WDG IR+FS + L+ LT H I + + + +
Sbjct: 238 GCSAISFSPNSKQIIAGFWDGSIRVFSRHRLNVLLALTNAHSSTISSIIWLPPE----QG 293
Query: 400 YIMAAGGLDGAITLWDL 350
I+ A D ++LW L
Sbjct: 294 EIVIATSSDSTVSLWKL 310
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.067
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Frame = -3
Query: 553 SDGKVFTSGGWDGHIRIFSW--------FSMRPLVVLTEHKQAIQDVAYSTEKVSL 410
S GK+F +GG DGHIRI++ +P++ + HK + D+ +S + ++
Sbjct: 154 SRGKIFATGGADGHIRIWNAQIVFRAENEDAQPILTIQAHKADVDDIDFSKDSKTI 209
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 33.9 bits (74), Expect = 0.089
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = -3
Query: 565 VKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAA 386
+K D ++ SGG D + +++ P+ T+H A++ +A+S L +
Sbjct: 528 LKWSPDKQLLASGGNDNQLLVWNLRRNEPIQTYTQHNAAVKALAWSPHHHGL---LVSGG 584
Query: 385 GGLDGAITLWDLYNSQAMK 329
G D + W+ +Q M+
Sbjct: 585 GTADRCLRFWNTLTAQPMQ 603
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.12
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = -3
Query: 574 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYI 395
++ V DG + SG +DG +RI+ + + + L + + VA+ K S YI
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN--PPVAF--VKFSPNGKYI 271
Query: 394 MAAGGLDGAITLWDLYNSQAMK 329
+A+ LD + LWD + +K
Sbjct: 272 LAS-NLDSTLKLWDFSKGKTLK 292
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/83 (19%), Positives = 35/83 (42%)
Frame = -3
Query: 577 GINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAY 398
G+N + SD + S D ++IF + R L H + ++ + +
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ------SS 184
Query: 397 IMAAGGLDGAITLWDLYNSQAMK 329
++ +G D ++ +WD+ +K
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIK 207
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -3
Query: 574 INKVKTRSDGKVFTSGGWDGHIRIFSWFSM-RPLVVLTEHKQAIQDVAYSTEKVSLWKAY 398
I+ V+ + + G DG +++F+ + ++ + HK+A+ + +S++ +
Sbjct: 63 ISCVRQCENKPLLAIGYADGSVKLFNQENEDSEPIMFSGHKKAVNCIEFSSDGL------ 116
Query: 397 IMAAGGLDGAITLWDLYNSQAM 332
+ A GG DG I LWD+ + M
Sbjct: 117 LFATGGKDGVIVLWDILAERGM 138
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -3
Query: 574 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAY 431
+N ++ SDG +F +GG DG I ++ + R + L HK+++ + +
Sbjct: 106 VNCIEFSSDGLLFATGGKDGVIVLWDILAERGMFRLHGHKESVTQMKF 153
>Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical
protein C08B6.7 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = -3
Query: 553 SDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLD 374
SDGK+ + DG +RIF++ + L V+ + + +++S + A ++A GG D
Sbjct: 315 SDGKMMATVSHDGFLRIFNYHAQELLAVMKSYFGGLLTLSWSPD------AKLIATGGED 368
Query: 373 GAITLWDL 350
+T++ +
Sbjct: 369 DLLTVYSV 376
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = -3
Query: 541 VFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAIT 362
VF S G D + ++ +P + H + + ++ + YI+A G +D +
Sbjct: 236 VFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNP-----FSEYILATGSVDKTVA 290
Query: 361 LWDLYN 344
LWD+ N
Sbjct: 291 LWDMRN 296
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -3
Query: 469 LTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWD 353
LT HK++++D+A+S + L +A+ DG+I LWD
Sbjct: 271 LTGHKKSVEDLAWSPTETGL-----LASCSADGSIKLWD 304
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 574 INKVKTRSDGKVFTSGGWDGHIRIFSWFSM---RPLVVLTEHKQAIQDVAYSTEKVSLWK 404
+N + + SGG DG ++I+S ++ +P+ + H I V + + + +
Sbjct: 325 VNVISWNRHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTF- 383
Query: 403 AYIMAAGGLDGAITLWDL 350
A G D T+WD+
Sbjct: 384 ----MASGEDDQTTIWDI 397
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 31.1 bits (67), Expect = 0.63
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -3
Query: 550 DGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDG 371
DG V +GG D + R++ + R ++ L H + I V + + Y M G D
Sbjct: 349 DGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEW------MPNGYEMITGSSDN 402
Query: 370 AITLWDL 350
++ +WDL
Sbjct: 403 SMKVWDL 409
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = -3
Query: 595 VTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKV 416
+T N ++ V SDG+ SG WD +R++ H + + VA+S +
Sbjct: 65 LTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR 124
Query: 415 SLWKAYIMAAGGLDGAITLWD 353
+ +G D +I LW+
Sbjct: 125 QI------VSGSRDKSIKLWN 139
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -3
Query: 541 VFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAIT 362
V S GWD +++++ + R H + V S + + A+GG DG
Sbjct: 170 VIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPD------GSLCASGGKDGQAM 223
Query: 361 LWDL 350
LWDL
Sbjct: 224 LWDL 227
>AL132904-21|CAE54912.1| 133|Caenorhabditis elegans Hypothetical
protein Y111B2A.28 protein.
Length = 133
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -3
Query: 538 FTSGGWDGHIRIFSWFSMRPLVVLTEHKQ-AIQDVAYSTEKVSLWKAYIMAAGGLDGAIT 362
F G DG + I+ S P + ++ AI V +S E A + AG +DG I
Sbjct: 30 FAVGRNDGTMCIYEMDSNSPRSIFQSNQMMAIVKVIWSMEG----NAPYVTAGSIDGTIR 85
Query: 361 LWDLYNSQAMK*SHN 317
++D +S +K HN
Sbjct: 86 IFDARDSSLVKELHN 100
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3
Query: 493 FSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSQAM 332
F +P +L H I DV++S K Y + + G+D + LW L ++ +
Sbjct: 705 FCAKPFALLKGHTADILDVSWS-------KNYFILSSGMDRTVKLWHLSRNECL 751
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3
Query: 493 FSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSQAM 332
F +P +L H I DV++S K Y + + G+D + LW L ++ +
Sbjct: 705 FCAKPFALLKGHTADILDVSWS-------KNYFILSSGMDRTVKLWHLSRNECL 751
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/82 (28%), Positives = 36/82 (43%)
Frame = -3
Query: 574 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYI 395
++ V DG SG +DG +RI W S V T + + + K S YI
Sbjct: 235 VSSVCFNRDGAYLASGSYDGIVRI--WDSTTGTCVKTLIDEEHPPITH--VKFSPNGKYI 290
Query: 394 MAAGGLDGAITLWDLYNSQAMK 329
+A+ L+ + LWD + +K
Sbjct: 291 LAS-NLNNTLKLWDYQKLRVLK 311
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/79 (25%), Positives = 33/79 (41%)
Frame = -3
Query: 574 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYI 395
+N + S G+ G W +RI+ S + E + + V + E W
Sbjct: 84 VNALSLTSTGRDLAVGAWQ-KVRIYDVSSGKDPKATIELPKNVTVVGF--EAAGRW---- 136
Query: 394 MAAGGLDGAITLWDLYNSQ 338
M GG DG +W++ N+Q
Sbjct: 137 MYTGGDDGVCRIWEMRNNQ 155
>Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = -3
Query: 472 VLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSQAMK*SHNVIL*FASY 293
VL HK+ + DVA++++ K ++ +G D ++ LWD+ + + + H I Y
Sbjct: 86 VLKGHKKEVTDVAFASD----GKKFVSISG--DRSVILWDVRDFENKE--HKCIRQTVEY 137
Query: 292 DLP 284
D P
Sbjct: 138 DTP 140
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = -3
Query: 541 VFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAIT 362
+ S G+D +R++ + + + + H I ++Y+ + MA DG I
Sbjct: 311 LIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHD------GNTMATSSYDGCIR 364
Query: 361 LWDLYNSQAMK 329
+WD + +K
Sbjct: 365 VWDAASGSCLK 375
>Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = -3
Query: 472 VLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSQAMK*SHNVIL*FASY 293
VL HK+ + DVA++++ K ++ +G D ++ LWD+ + + + H I Y
Sbjct: 86 VLKGHKKEVTDVAFASD----GKKFVSISG--DRSVILWDVRDFENKE--HKCIRQTVEY 137
Query: 292 DLP 284
D P
Sbjct: 138 DTP 140
>Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = -3
Query: 472 VLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSQAMK*SHNVIL*FASY 293
VL HK+ + DVA++++ K ++ +G D ++ LWD+ + + + H I Y
Sbjct: 86 VLKGHKKEVTDVAFASD----GKKFVSISG--DRSVILWDVRDFENKE--HKCIRQTVEY 137
Query: 292 DLP 284
D P
Sbjct: 138 DTP 140
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 520 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 350
DG+I I+ + + L H+ + S + LW +GGLD ++ WDL
Sbjct: 437 DGNILIYDIHNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDL 487
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 520 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 350
DG+I I+ + + L H+ + S + LW +GGLD ++ WDL
Sbjct: 437 DGNILIYDIHNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDL 487
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 520 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 350
DG+I I+ + + L H+ + S + LW +GGLD ++ WDL
Sbjct: 437 DGNILIYDIHNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDL 487
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 520 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 350
DG+I I+ + + L H+ + S + LW +GGLD ++ WDL
Sbjct: 437 DGNILIYDIHNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDL 487
>AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical
protein Y110A7A.9b protein.
Length = 908
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 409 WKAYIMAAGGLDGAITLWDLYNSQA 335
WK I+A G ++G + +WDL Q+
Sbjct: 496 WKDDILAVGDVEGNLVVWDLGRRQS 520
>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
protein Y110A7A.9a protein.
Length = 1019
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 409 WKAYIMAAGGLDGAITLWDLYNSQA 335
WK I+A G ++G + +WDL Q+
Sbjct: 607 WKDDILAVGDVEGNLVVWDLGRRQS 631
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = -3
Query: 520 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 350
D +RI++W S + +LT H + + + ++A+ LD + +WD+
Sbjct: 116 DQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTE------DLVASASLDQTVRVWDI 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,044,986
Number of Sequences: 27780
Number of extensions: 255294
Number of successful extensions: 607
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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