Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0404
(600 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.3
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 24 1.3
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 24 1.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 5.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 5.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 5.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 5.3
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 5.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 5.3
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 9.2
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 9.2
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 445 ELPVYVL*GLLRVSLRTMKIYECVHPSLRS*ILYHHSVSS 564
ELP ++ L + + M++ + HP+ + HH+ SS
Sbjct: 378 ELPKHLPTSLTKSKMEVMELSDLHHPNCKINRKVHHTTSS 417
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 400 YIMAAGGLDGAITLWDLYNSQAMK*SHNVIL 308
+I G + G TL D+YN+ M + NVI+
Sbjct: 163 WIYGGGFMSGTATL-DVYNADIMAATSNVII 192
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 400 YIMAAGGLDGAITLWDLYNSQAMK*SHNVIL 308
+I G + G TL D+YN+ M + NVI+
Sbjct: 163 WIYGGGFMSGTATL-DVYNADIMAATSNVII 192
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 116 TKDRNSYFPVIFTPD*IL 63
T+DR YF +F P IL
Sbjct: 297 TRDRAFYFTTVFIPGIIL 314
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 116 TKDRNSYFPVIFTPD*IL 63
T+DR YF +F P IL
Sbjct: 266 TRDRAFYFTTVFIPGIIL 283
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 116 TKDRNSYFPVIFTPD*IL 63
T+DR YF +F P IL
Sbjct: 317 TRDRAFYFTTVFIPGIIL 334
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 116 TKDRNSYFPVIFTPD*IL 63
T+DR YF +F P IL
Sbjct: 266 TRDRAFYFTTVFIPGIIL 283
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 202 SYY-VQIYVEALYCVGVMWPSY 140
SYY +QIY+ V V W S+
Sbjct: 242 SYYLIQIYIPCCMLVIVSWVSF 263
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 202 SYY-VQIYVEALYCVGVMWPSY 140
SYY +QIY+ V V W S+
Sbjct: 242 SYYLIQIYIPCCMLVIVSWVSF 263
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 91 GKYEFLSFVNFLA*HLHSSATLHQ 162
G+ +F + +NF LH+S TL +
Sbjct: 542 GREDFWNSINFNENKLHTSDTLKE 565
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 91 GKYEFLSFVNFLA*HLHSSATLHQ 162
G+ +F + +NF LH+S TL +
Sbjct: 542 GREDFWNSINFNENKLHTSDTLKE 565
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,332
Number of Sequences: 438
Number of extensions: 3527
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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