Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0403
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   2.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   8.9  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +2

Query: 329 FRVHPVHSQLGRSFGDYEQRCTSWPDAPGRCLYLD 433
           FR    +S  G   G Y   C   P    +CL L+
Sbjct: 76  FRPMHQNSYTGYHLGSYAANCPPSPKDDEKCLSLE 110


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = -3

Query: 143 WPVPSGIRGRRKKGMVLPKL--ILPR 72
           W VP  +RGR+ +     KL  + PR
Sbjct: 462 WYVPKSLRGRKDEADYKDKLHKVAPR 487


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 281 CPCLHQKERAGRVGRGFRVHPVHS 352
           CP   + ER G  G   R   +HS
Sbjct: 293 CPNCQEAERLGPAGVHLRKKNIHS 316


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 333 RKPRPTRPAR 304
           RKPRP RP +
Sbjct: 263 RKPRPPRPTQ 272


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 371  GDYEQRCTSWPDAPGR 418
            GDYE    S PD  GR
Sbjct: 1399 GDYENDSGSGPDRIGR 1414


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 371  GDYEQRCTSWPDAPGR 418
            GDYE    S PD  GR
Sbjct: 1399 GDYENDSGSGPDRIGR 1414


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 371  GDYEQRCTSWPDAPGR 418
            GDYE    S PD  GR
Sbjct: 1399 GDYENDSGSGPDRIGR 1414


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 371  GDYEQRCTSWPDAPGR 418
            GDYE    S PD  GR
Sbjct: 1399 GDYENDSGSGPDRIGR 1414


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 212 PPPERRLT 189
           PPPE RLT
Sbjct: 103 PPPEERLT 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,278
Number of Sequences: 336
Number of extensions: 2014
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)