Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0403
         (436 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83116-12|CAB60294.2|  346|Caenorhabditis elegans Hypothetical p...    32   0.21 
Z81047-15|CAB02826.2|  346|Caenorhabditis elegans Hypothetical p...    32   0.21 
Z81587-6|CAB04704.1|  417|Caenorhabditis elegans Hypothetical pr...    31   0.48 
Z81071-2|CAB03012.1|  618|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U80437-18|AAB37629.1|  518|Caenorhabditis elegans Cell division ...    29   1.9  
Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical pr...    28   2.5  
AF125952-8|AAD14692.1|  349|Caenorhabditis elegans Seven tm rece...    27   4.4  
AC006722-14|AAK68413.1|  349|Caenorhabditis elegans Seven tm rec...    27   4.4  
Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical pr...    27   5.9  
AF125965-2|AAL38961.1|  366|Caenorhabditis elegans Hypothetical ...    27   5.9  
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z83116-12|CAB60294.2|  346|Caenorhabditis elegans Hypothetical
           protein C41G6.2 protein.
          Length = 346

 Score = 31.9 bits (69), Expect = 0.21
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 79  RISFGSTIPFLRLPRMPDGTGHWSSVITAIGLCGLRIVSLRS 204
           R  +   IP ++L +  +  GH  +V  AI LC +RI+SL+S
Sbjct: 96  RSDYKDFIPVIKLQQKLEALGHRLAVWLAILLCFIRIISLKS 137


>Z81047-15|CAB02826.2|  346|Caenorhabditis elegans Hypothetical
           protein C41G6.2 protein.
          Length = 346

 Score = 31.9 bits (69), Expect = 0.21
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 79  RISFGSTIPFLRLPRMPDGTGHWSSVITAIGLCGLRIVSLRS 204
           R  +   IP ++L +  +  GH  +V  AI LC +RI+SL+S
Sbjct: 96  RSDYKDFIPVIKLQQKLEALGHRLAVWLAILLCFIRIISLKS 137


>Z81587-6|CAB04704.1|  417|Caenorhabditis elegans Hypothetical
           protein T06G6.8 protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 0.48
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 31  NNLSIKTSDASESVRGRISFGSTIPFLRLPRMPDGTGHWSSVITAIGLCGL 183
           +NLS+K+S A + +   +  GS +  + + R P G   W        LCGL
Sbjct: 150 SNLSVKSSHARDWLGAPLMRGSVVIGISIGRSPTGDSAWFLKPDNYALCGL 200


>Z81071-2|CAB03012.1|  618|Caenorhabditis elegans Hypothetical
           protein F28F8.2 protein.
          Length = 618

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -3

Query: 230 LQQLSLPPPERRLTILS--PHSPMAVMTELQWPVPSGIRG 117
           + +L + P ER  ++ S  PH  +A++ E   PVP+G +G
Sbjct: 406 MSELHVDPFERIKSVGSVMPHQELAIVDEFGVPVPTGAKG 445


>U80437-18|AAB37629.1|  518|Caenorhabditis elegans Cell division
           cycle related protein6 protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = -3

Query: 251 ASTDRRALQQLSLPPPERRLTILSPHSPMAVMTE-LQWPVPSGIRGRRKKGMVL-PKLIL 78
           +S++   L Q  +   E+R  +LSP S +A   E L+   P   RGR +K   L  +L  
Sbjct: 70  SSSEDELLPQTKMASEEKRKLLLSPGSSLADRVEKLEISSPRA-RGRPRKATNLKSQLTT 128

Query: 77  PRTDSEAS 54
           PRT  + S
Sbjct: 129 PRTPEKQS 136


>Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical
           protein C30F2.1 protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3

Query: 326 RGLPARRALSGEDMGTSAEKRRGLFASTDRRALQQLSLPPPE 201
           RG P RR   G+D    A  RRGL + T    +++L  PP E
Sbjct: 158 RGPPGRRGRMGDDGEPGAPGRRGL-SGTFLTGIKKLRGPPGE 198


>AF125952-8|AAD14692.1|  349|Caenorhabditis elegans Seven tm
           receptor protein 76 protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 106 FLRLPRMPDGTGHWSSVITAIG 171
           FL LP  PD T  WSSV   +G
Sbjct: 181 FLALPYNPDNTVRWSSVYYFVG 202


>AC006722-14|AAK68413.1|  349|Caenorhabditis elegans Seven tm
           receptor protein 265 protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 106 FLRLPRMPDGTGHWSSVITAIG 171
           FL LP  PD T  WSSV   +G
Sbjct: 181 FLALPYNPDNTVRWSSVYYFVG 202


>Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical
           protein T08G3.8 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -2

Query: 150 TPMAGPIRHSWQTQERNGAAETDSSTHRF*SIRGFYRKVVTILLLFTNV 4
           TP+  P  H      R    + DS TH +  I    + +   L++ +NV
Sbjct: 167 TPLGAPFPHGAMIISRGAHDDNDSETHLYTIIELTMKPLTVALVILSNV 215


>AF125965-2|AAL38961.1|  366|Caenorhabditis elegans Hypothetical
           protein H43I07.2 protein.
          Length = 366

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1

Query: 142 GRSHPAFVADARKEWCCRN*FFHAPILK 59
           G    A V DARK+ C RN F H  + K
Sbjct: 289 GAKRIAVVKDARKDTCSRNVFRHEDLSK 316


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 19/64 (29%), Positives = 26/64 (40%)
 Frame = -3

Query: 353 ASERDVRESRGLPARRALSGEDMGTSAEKRRGLFASTDRRALQQLSLPPPERRLTILSPH 174
           A +R    S+  PARR  S     +    RR    S  R    +  +PP  RR +  +  
Sbjct: 360 APKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASK 419

Query: 173 SPMA 162
           SP A
Sbjct: 420 SPPA 423


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,507,725
Number of Sequences: 27780
Number of extensions: 192572
Number of successful extensions: 580
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)