Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0402
         (567 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q01819 Cluster: Connectin precursor; n=3; Diptera|Rep: ...    59   6e-08
UniRef50_Q16QN1 Cluster: Reticulon/nogo receptor; n=3; Culicidae...    40   0.054
UniRef50_A5Z4S1 Cluster: Putative uncharacterized protein; n=1; ...    36   0.50 
UniRef50_Q4P5H5 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_Q5FLF7 Cluster: Ribokinase; n=6; Lactobacillales|Rep: R...    32   8.1  
UniRef50_A2F2P9 Cluster: Beige/BEACH domain containing protein; ...    32   8.1  

>UniRef50_Q01819 Cluster: Connectin precursor; n=3; Diptera|Rep:
           Connectin precursor - Drosophila melanogaster (Fruit
           fly)
          Length = 682

 Score = 59.3 bits (137), Expect = 6e-08
 Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = +3

Query: 321 CYCTKDNQNPKIFKSADCFLFAEHVKPEDDTWTAFDYLKDVTKLTFT-KNNITMKYIPTE 497
           CYCT D  +  + K A+C++F+E +   D TWT F   K + +L F  +NN  + YIPT 
Sbjct: 110 CYCTPDENHVPVQK-AECWVFSEGLHQNDTTWTRFYQQKRLRELKFVIQNNARLDYIPTM 168

Query: 498 ALKYTKSVLNLDIKYGNIEKV 560
            ++  K++ ++ I+Y  +E V
Sbjct: 169 IIEPLKNLSSIVIEYSQVEIV 189


>UniRef50_Q16QN1 Cluster: Reticulon/nogo receptor; n=3;
           Culicidae|Rep: Reticulon/nogo receptor - Aedes aegypti
           (Yellowfever mosquito)
          Length = 523

 Score = 39.5 bits (88), Expect = 0.054
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = +3

Query: 321 CYCTKDNQNPKIFKSADCFLFAEHVKPEDDTWTAFDYLKDVTKLTFT-KNNITMKYIPTE 497
           C+C+ +       + A C +F   +  +D  W AF     +  L FT + +  + YIP++
Sbjct: 71  CHCSPEGHAKA--QKASCSIFDGELPRKDANWLAFHTQTSLENLKFTVRKSGNLTYIPSD 128

Query: 498 ALKYTKSVLNLDIKYGNIEKV 560
            L   K +  L I+YG I  +
Sbjct: 129 VLFTLKKLRTLTIEYGIISDI 149


>UniRef50_A5Z4S1 Cluster: Putative uncharacterized protein; n=1;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 237

 Score = 36.3 bits (80), Expect = 0.50
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = +3

Query: 336 DNQNPKIFKSADCFLFAEHVKPEDDTWTAFDYLKDVTK-LTFTK-NNITMKYIPTEALKY 509
           D  N KI+      ++ +++   D T+  + Y KD  K L F K NNI +  I  E L Y
Sbjct: 42  DKTNNKIYIDN---IYDDYMNSYDTTFCGYIYEKDSEKFLNFLKENNIAIGVINAELLIY 98

Query: 510 TKSVLNLDIKYGNIEKV 560
               L++ +KY N+ ++
Sbjct: 99  RYKNLSVPVKYNNLSRI 115


>UniRef50_Q4P5H5 Cluster: Putative uncharacterized protein; n=1;
            Ustilago maydis|Rep: Putative uncharacterized protein -
            Ustilago maydis (Smut fungus)
          Length = 1161

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -3

Query: 214  HDCDHPPEVHVG*HIKNDSSNFLFKNNSLESHYNIIALFKFRTTTPFFEFAMSA 53
            H C HP    V    K D+S+ LF  ++++ HY    L ++  TTP  + ++ A
Sbjct: 876  HHCHHPARRRVV--CKLDTSHGLFVGHAIQDHYYATTLLRYYATTPLRDRSLPA 927


>UniRef50_Q5FLF7 Cluster: Ribokinase; n=6; Lactobacillales|Rep:
           Ribokinase - Lactobacillus acidophilus
          Length = 307

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 354 IFKSADCFLFAEHVKPEDDTWTAFDYLKDVTKLTFTKNNITMKYIPTEALKYT 512
           + KS DC + A+   P + T  AF   K   K+T       ++ IP E LKYT
Sbjct: 128 LIKSWDCII-AQFETPIEVTTAAFKMAKKAGKITILNPAPAVEEIPEELLKYT 179


>UniRef50_A2F2P9 Cluster: Beige/BEACH domain containing protein; n=1;
            Trichomonas vaginalis G3|Rep: Beige/BEACH domain
            containing protein - Trichomonas vaginalis G3
          Length = 2397

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = +3

Query: 327  CTKDNQNPKIFKSAD--CFLFAEHVKPEDDTWTAFDYLKDVTKLTFTKN-NITMKYIPTE 497
            C+  N+NP+   S+   CF+F++    E+   TAF  L       F KN +I        
Sbjct: 1086 CSYSNRNPQFITSSSYACFIFSKFALSENAWLTAFSILGGFVVKKFPKNMSIQRPLFAPV 1145

Query: 498  ALKYTKSVLNLDIKYGNIEKV 560
             L+   S+LN +     ++K+
Sbjct: 1146 ILEMLCSLLNSNSNLDLLQKI 1166


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,344,599
Number of Sequences: 1657284
Number of extensions: 9897274
Number of successful extensions: 25102
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25098
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)