Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0402
         (567 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.0  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   4.0  
AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription fact...    24   4.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.2  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   9.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 99   SNFERRHHSSNSLCPPRKH 43
            SNF   HH  NS+ P  +H
Sbjct: 1961 SNFILLHHGENSVAPLHRH 1979


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 99   SNFERRHHSSNSLCPPRKH 43
            SNF   HH  NS+ P  +H
Sbjct: 1962 SNFILLHHGENSVAPLHRH 1980


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 420 AFDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEK 557
           A +YLK    LT T+N    KY+  +  K  +  +  D   G + K
Sbjct: 293 AVEYLKQENTLTRTRNQQIQKYLCEQKRKIGEFEVERDQAAGILAK 338


>AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription factor
           zen protein.
          Length = 52

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 126 RVTTTSLHYSNFERRHHSSNSLCPPRK 46
           R   TS      E+  HS+  LC PR+
Sbjct: 4   RTAFTSSQLVELEKEFHSNRYLCRPRR 30


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 302  NTLGRSMLLHQRQSKSEDI*K 364
            NTLG + LL    SKSE + K
Sbjct: 1232 NTLGHNGLLDAEHSKSEQLLK 1252


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +2

Query: 230 FVQSKSTHHQKRATRPNICDLVYNNTLGRSMLLH 331
           F     +HH+   T   +C L++ N    + +L+
Sbjct: 524 FAGGGHSHHRSNDTTDALCGLIFCNNRAMARILY 557


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 544  PYLMSKLSTDFVYFNASVGIYFMVIL 467
            PY +  ++  +V  NASVG    +IL
Sbjct: 1058 PYFVDSVNDYYVSENASVGAEIAIIL 1083


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,289
Number of Sequences: 2352
Number of extensions: 11067
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)