Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0401
(621 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00004988F9 Cluster: hypothetical protein 6.t00007; n... 35 1.4
UniRef50_Q6MEI2 Cluster: Putative uncharacterized protein; n=2; ... 35 1.4
UniRef50_Q4GYA3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q3AQJ1 Cluster: Glycosyl transferase; n=1; Chlorobium c... 33 5.5
UniRef50_Q8JJW0 Cluster: Minor coat protein; n=1; Sweet potato c... 33 7.3
UniRef50_Q7R7X3 Cluster: Putative yir1 protein; n=3; Plasmodium ... 33 7.3
UniRef50_Q4RZG7 Cluster: Chromosome undetermined SCAF14928, whol... 32 9.6
UniRef50_Q7RKF6 Cluster: Chloroquine resistance marker protein, ... 32 9.6
>UniRef50_UPI00004988F9 Cluster: hypothetical protein 6.t00007; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 6.t00007 - Entamoeba histolytica HM-1:IMSS
Length = 525
Score = 35.1 bits (77), Expect = 1.4
Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Frame = -2
Query: 422 LVVIACFPKLRQIRAKTIKL*HAVTRRSTYMH*SDILYKIIHSLLDSPELLSQISLNIKF 243
+V+ + FP +++ + I H +T+ + Y SD + +++ L+ + Q+S ++K
Sbjct: 101 VVIASLFPNDFKMQQRAIT--HFLTKFNNYTADSDGIIQLLWLLIQYHD--PQLSNHLK- 155
Query: 242 SARRVNQNNLFALLIYKNNISYYNPITRMCRTYNELARSSPELDIF-TCRL-VTFR-KMF 72
+ +N +L Y I +Y+PI + Y+ L SSP + +F C + +T R ++F
Sbjct: 156 -SLSINLKSLVLQHFYSLFIQFYDPIDTVLSLYDRLLYSSPIIPMFILCSIFITHRNELF 214
Query: 71 K 69
K
Sbjct: 215 K 215
>UniRef50_Q6MEI2 Cluster: Putative uncharacterized protein; n=2;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative uncharacterized protein - Protochlamydia
amoebophila (strain UWE25)
Length = 143
Score = 35.1 bits (77), Expect = 1.4
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = -2
Query: 281 PELLS-QISLNIKFSARRVNQNNLFALLIYKNNISYYNPITRMCRTYNELARSSP-ELDI 108
P+ LS Q+S I F R+NQ L+ ++ PI +CR E+A+ P L I
Sbjct: 14 PDSLSPQLSNLIVFKRPRLNQEIAQEKLLLLKLVTISQPIFEICRANQEIAQEKPFWLKI 73
Query: 107 FTCRLVTFRKMFKGILHFINR 45
F+ +F+ I FINR
Sbjct: 74 IAIAQPIFKILFQ-IFEFINR 93
>UniRef50_Q4GYA3 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 73
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 214 CLHC*FTKTIYLTIIPLPECVVPITNWQGRHLS*IFLLV 98
CLH Y+ PLP C+ + N+ H S +FLLV
Sbjct: 34 CLHAPEVLLFYIVYTPLPNCLFVVVNFYDCHSSCLFLLV 72
>UniRef50_Q3AQJ1 Cluster: Glycosyl transferase; n=1; Chlorobium
chlorochromatii CaD3|Rep: Glycosyl transferase -
Chlorobium chlorochromatii (strain CaD3)
Length = 325
Score = 33.1 bits (72), Expect = 5.5
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 230 VNQNNLFALLIYKNNISYYNPITRMC 153
V++NNL A +YKNN+S NP +C
Sbjct: 128 VDKNNLAATSLYKNNLSLVNPFLGLC 153
>UniRef50_Q8JJW0 Cluster: Minor coat protein; n=1; Sweet potato
chlorotic stunt virus|Rep: Minor coat protein - Sweet
potato chlorotic stunt virus
Length = 684
Score = 32.7 bits (71), Expect = 7.3
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 64 MPLNIFLNVTNLQVKISNSGDDLAS 138
+PL++F +VTNL +KI SGDD S
Sbjct: 213 IPLSVFNSVTNLNLKILRSGDDSTS 237
>UniRef50_Q7R7X3 Cluster: Putative yir1 protein; n=3; Plasmodium
yoelii yoelii|Rep: Putative yir1 protein - Plasmodium
yoelii yoelii
Length = 340
Score = 32.7 bits (71), Expect = 7.3
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -2
Query: 221 NNLFALLIYKNNIS-YYNPITRMCRTYNELARSSPELDIFTCRLVTFRKMFKGILHFIN 48
N + + I NNIS +Y+ +C YNE+ + +PE D + F K + + N
Sbjct: 170 NEIHFMTIDINNISKFYDAFKLLCNMYNEITKETPECDKYMNYADEFVKKYDDLTRNFN 228
>UniRef50_Q4RZG7 Cluster: Chromosome undetermined SCAF14928, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14928,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 221
Score = 32.3 bits (70), Expect = 9.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 355 QSLEDRRTCTDLIYYIR*FTLCWIRLNCYL 266
Q + RRT T L+ + F +CW LNCY+
Sbjct: 138 QRKKRRRTLTMLLLVVGVFAVCWFPLNCYV 167
>UniRef50_Q7RKF6 Cluster: Chloroquine resistance marker protein,
putative; n=18; Plasmodium (Vinckeia)|Rep: Chloroquine
resistance marker protein, putative - Plasmodium yoelii
yoelii
Length = 6636
Score = 32.3 bits (70), Expect = 9.6
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Frame = -2
Query: 290 LDSPELLSQISLNIKFS------ARRVNQNNLFALLIYKNNISYYNPITRMCRTYNELAR 129
L SP L +++NI FS ++ V +N I NNI Y N I + CR L
Sbjct: 2657 LMSPLLPCIVNINILFSQITSAISKPVTKNPFLKAYIDWNNIPYNNIILQPCRANFNLEI 2716
Query: 128 SSPELDIFTCRLVTFRKM 75
P L+I R + K+
Sbjct: 2717 KIPSLEILLMRCLGINKI 2734
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,317,136
Number of Sequences: 1657284
Number of extensions: 10077456
Number of successful extensions: 19089
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19085
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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