Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0401
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.68 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.3  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 613 MHMTNSGSSIIHKELILISVYMCSPQSLSNPY 518
           M M N GSSI  K+  ++   +    +L NPY
Sbjct: 151 MSMRNYGSSINMKKRFVVMTSVIMTLALGNPY 182


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -2

Query: 314 LYKIIHSLLDSPELLSQISLNIKFSARRVNQNNLFALLIYKNNISY 177
           +Y+I+       +  S+   N+K    R  + NL+ LL++  N+ Y
Sbjct: 66  VYQILAYNFWKKKYWSEFLANLKLLKGRKIRKNLYYLLLFVINVLY 111


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 502 NHKSAHLYSHNSAMKEVVK 446
           N  + H Y+HN+ M   VK
Sbjct: 32  NQNTEHNYTHNNEMYHSVK 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,230
Number of Sequences: 336
Number of extensions: 2956
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)