Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0401
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001704-1|AAN71459.1|  699|Drosophila melanogaster RE64196p pro...    30   2.9  
AY075576-1|AAL68381.1|  400|Drosophila melanogaster SD05875p pro...    30   2.9  
AE014297-3693|AAN14033.1|  400|Drosophila melanogaster CG31110-P...    30   2.9  

>BT001704-1|AAN71459.1|  699|Drosophila melanogaster RE64196p
           protein.
          Length = 699

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/83 (25%), Positives = 34/83 (40%)
 Frame = -2

Query: 302 IHSLLDSPELLSQISLNIKFSARRVNQNNLFALLIYKNNISYYNPITRMCRTYNELARSS 123
           + SL + PE L Q+ L+   +   V Q    AL + +     Y       + +      +
Sbjct: 20  VGSLFEDPERLLQLWLSEFLAKIAVAQPRFLALHLQEVGGKTYEKSMEYVQEFIRCLCDA 79

Query: 122 PELDIFTCRLVTFRKMFKGILHF 54
           PE+  FTC  +   + FK   HF
Sbjct: 80  PEMGDFTCVHIFMDEDFKSAEHF 102


>AY075576-1|AAL68381.1|  400|Drosophila melanogaster SD05875p
           protein.
          Length = 400

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/83 (25%), Positives = 34/83 (40%)
 Frame = -2

Query: 302 IHSLLDSPELLSQISLNIKFSARRVNQNNLFALLIYKNNISYYNPITRMCRTYNELARSS 123
           + SL + PE L Q+ L+   +   V Q    AL + +     Y       + +      +
Sbjct: 20  VGSLFEDPERLLQLWLSEFLAKIAVAQPRFLALHLQEVGGKTYEKSMEYVQEFIRCLCDA 79

Query: 122 PELDIFTCRLVTFRKMFKGILHF 54
           PE+  FTC  +   + FK   HF
Sbjct: 80  PEMGDFTCVHIFMDEDFKSAEHF 102


>AE014297-3693|AAN14033.1|  400|Drosophila melanogaster CG31110-PA
           protein.
          Length = 400

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/83 (25%), Positives = 34/83 (40%)
 Frame = -2

Query: 302 IHSLLDSPELLSQISLNIKFSARRVNQNNLFALLIYKNNISYYNPITRMCRTYNELARSS 123
           + SL + PE L Q+ L+   +   V Q    AL + +     Y       + +      +
Sbjct: 20  VGSLFEDPERLLQLWLSEFLAKIAVAQPRFLALHLQEVGGKTYEKSMEYVQEFIRCLCDA 79

Query: 122 PELDIFTCRLVTFRKMFKGILHF 54
           PE+  FTC  +   + FK   HF
Sbjct: 80  PEMGDFTCVHIFMDEDFKSAEHF 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,938,454
Number of Sequences: 53049
Number of extensions: 464926
Number of successful extensions: 781
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)