Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0399
         (395 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-11|CAB60517.1|  440|Caenorhabditis elegans Hypothetical...    39   0.001
AF069986-1|AAC39136.1|  440|Caenorhabditis elegans nitrilase and...    39   0.001
Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical pr...    28   2.1  
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr...    27   3.7  
Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical pr...    27   3.7  
U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...    27   6.4  

>AL132860-11|CAB60517.1|  440|Caenorhabditis elegans Hypothetical
           protein Y56A3A.13 protein.
          Length = 440

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 23/55 (41%), Positives = 29/55 (52%)
 Frame = +2

Query: 47  TVLRRATMLKRGFKIALIQLSVGPDKSKNIAQAVKEIHLAKEKGAQLVALPECFN 211
           TV RR     R F IA+ Q++   D  KN   A   I  A EK  ++V LPECF+
Sbjct: 4   TVFRRTMATGRHF-IAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFD 57


>AF069986-1|AAC39136.1|  440|Caenorhabditis elegans nitrilase and
           fragile histidinetriad fusion protein NitFhit protein.
          Length = 440

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 23/55 (41%), Positives = 29/55 (52%)
 Frame = +2

Query: 47  TVLRRATMLKRGFKIALIQLSVGPDKSKNIAQAVKEIHLAKEKGAQLVALPECFN 211
           TV RR     R F IA+ Q++   D  KN   A   I  A EK  ++V LPECF+
Sbjct: 4   TVFRRTMATGRHF-IAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFD 57


>Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK1058.6 protein.
          Length = 305

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 86  KIALIQLSVGP-DKSKNIAQAVKEIHLAKEKGAQLVALPECFNSPY 220
           KIA++Q      DK   + +  K +  A   GA+LV  PE F   Y
Sbjct: 3   KIAIVQAGTPLFDKPATLEKVKKNVEEAAGNGAELVLFPEAFIGGY 48


>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
           protein F58H1.1a protein.
          Length = 1143

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 1   LLFLNHFYTLECYIHNGIET-SDHVEKRFQDSINSTIG 111
           +L L  F T+  Y++NGIET ++ + KR  + +   IG
Sbjct: 9   ILCLGVFLTVSLYLYNGIETGAEALTKRQANDLRRKIG 46


>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
           protein F58H1.1b protein.
          Length = 1145

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +1

Query: 1   LLFLNHFYTLECYIHNGIETSDHV---EKRFQDSINSTIG 111
           +L L  F T+  Y++NGIET        +R+ D +   IG
Sbjct: 9   ILCLGVFLTVSLYLYNGIETGAEALTKRQRYVDDLRRKIG 48


>Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical
           protein C30F2.1 protein.
          Length = 307

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +2

Query: 41  YITVLRRATMLKRGFKIALIQLSVGPDKSKNIAQAVKEIHLAKEKG--AQLVALPECFNS 214
           YITV +  + L    K ++ + SV  + +      + E+HL  ++G   + V +   F S
Sbjct: 29  YITVYQELSALSLNVKKSVAEFSVATNFAWEQIATLNELHLVSKRGISKKSVFVDRIFRS 88

Query: 215 PY 220
           P+
Sbjct: 89  PF 90


>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
 Frame = +2

Query: 155 IHLAKEKGAQLVALPECFNSPYG--TKY---FDEYAEEVPSGETSRALSK 289
           I  A   GA ++ L E +  P+   T+    + E+AE V +G T++ LSK
Sbjct: 106 IEAAASAGANVIGLQEAWTMPFAFCTRERLPWTEFAESVYTGPTTQFLSK 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,576,487
Number of Sequences: 27780
Number of extensions: 159570
Number of successful extensions: 348
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)