Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0399
         (395 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    26   0.18 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   5.1  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 25.8 bits (54), Expect = 0.18
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 192 PCRSASTLLTEPSILMNMQRKCHRGRRAELYPKPLQ 299
           PC   +T LTEP  L N  R+ +    A LYP  +Q
Sbjct: 194 PCNVLATSLTEPYTLRNYGRRINCTYVA-LYPSSVQ 228


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 1   LLFLNHFYTLECYIHNGIETSDHVEKRFQDSINSTIGGSR 120
           L F+N    +   IH+ +  +D VE R +   +S IG SR
Sbjct: 405 LWFINKIIPIRMSIHDELLGADLVEHRIR---HSQIGISR 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,626
Number of Sequences: 438
Number of extensions: 2174
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)