Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0397
         (490 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   6.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 329 RLVRGIGTHRILLQRSPQYSRFPFRSSSSV 240
           R V     + ILL+   ++  FPFR ++ +
Sbjct: 189 RAVIDFDNNEILLRNGEKHHSFPFRKTTEI 218


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 350 GYQTPESAKVENRVRSGDVTGS 415
           GY TPES   E   R+ D+T S
Sbjct: 44  GYHTPESLHYEG--RAVDITTS 63


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = -1

Query: 331  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFNC 215
            T+  +++G  V  F +      + +++P++     CF C
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTC 964


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = -1

Query: 331  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFNC 215
            T+  +++G  V  F +      + +++P++     CF C
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTC 964


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = -1

Query: 331  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFNC 215
            T+  +++G  V  F +      + +++P++     CF C
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTC 964


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = -1

Query: 331  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFNC 215
            T+  +++G  V  F +      + +++P++     CF C
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTC 964


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 384 IASDPETSPARISTRTAKTIS 446
           +  DP +SP   + RT  ++S
Sbjct: 158 VGGDPASSPGAAAGRTGNSLS 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,608
Number of Sequences: 336
Number of extensions: 2447
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)