Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0395
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.6  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   5.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.6  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.4  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 106 VNKEKPLLTIDEVLNSPKRKTLVRQDMTVQPTDSGS 213
           +N    + + ++ +  PKRKT   ++ +  PT S S
Sbjct: 88  LNNNNVVSSTNQEIRGPKRKTWKVEEDSPSPTSSVS 123


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +1

Query: 334 QWLDLTNIAIAKCLDMPVNSINIIVRRLGGGYGSKITRASQIACAAALVTRFL 492
           ++LD+    IAK   + V + N+      GG+       SQ+A  AA    F+
Sbjct: 74  EYLDVDAGTIAKLNALKVKNPNLKTLIAIGGWNEGSETYSQVAADAAKRATFI 126


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 349 TNIAIAKCLDMPVNSINIIVRRLGGG 426
           T  AIA  LD      NI+V  LGGG
Sbjct: 5   TAAAIAYGLDKKGAEQNILVYDLGGG 30



 Score = 21.0 bits (42), Expect = 7.4
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 40  IVADREKTATKLLDLSKSKYDFVNKEKPLLTIDEVL 147
           I AD++       ++ K+K D  +  K  LTI+ +L
Sbjct: 80  IRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLL 115


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 402 DVDTINGHIQTFCDCYV 352
           D+D + G + T C C+V
Sbjct: 191 DLDVVKGAMLTNCICFV 207


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 402 DVDTINGHIQTFCDCYV 352
           D+D + G + T C C+V
Sbjct: 191 DLDVVKGAMLTNCICFV 207


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 402 DVDTINGHIQTFCDCYV 352
           D+D + G + T C C+V
Sbjct: 191 DLDVVKGAMLTNCICFV 207


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 402 DVDTINGHIQTFCDCYV 352
           D+D + G + T C C+V
Sbjct: 191 DLDVVKGAMLTNCICFV 207


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 325 SKSLSHPQ*ELPQMFAFPSYNGIVHEF 245
           +K LS  + E+P+     SY G   +F
Sbjct: 526 AKILSQAKQEIPEWLGSKSYGGSADQF 552


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,348
Number of Sequences: 336
Number of extensions: 2974
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)