Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0395
(570 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 100 7e-22
SB_53911| Best HMM Match : Ald_Xan_dh_C2 (HMM E-Value=0) 78 4e-15
SB_27644| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=3.1e-26) 50 2e-06
SB_40646| Best HMM Match : eIF-5a (HMM E-Value=0.87) 33 0.16
SB_30599| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=7.7e-35) 33 0.22
SB_26655| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 29 2.0
SB_53036| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_42734| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_3996| Best HMM Match : Connexin (HMM E-Value=2.4) 29 3.5
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_18592| Best HMM Match : DUF1298 (HMM E-Value=0.85) 28 4.7
SB_10104| Best HMM Match : DUF1298 (HMM E-Value=0.85) 28 4.7
SB_6602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06) 28 6.2
SB_40500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1) 27 8.2
SB_21491| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 27 8.2
>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
Length = 1644
Score = 100 bits (240), Expect = 7e-22
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 18/193 (9%)
Frame = +1
Query: 34 GIIVADREKTATKLLDLSKSKYDFVNKEKPLLTIDEVLNSPKRKTL-VRQDMTVQPTDSG 210
G+IVAD + A + + K ++++ + P+L+I + + + L +D+ V T++
Sbjct: 1292 GLIVADTQLHADEAAE--KVNIEYLDAKPPILSIKDAIEAKSFIELRYIRDIAVGDTEAA 1349
Query: 211 SDIST-VIEGSMKIHAQYHYTMETQTSVATPTEDGLEIYSSTQWLDLTNIAIAKCLDM-- 381
S+ V+ G + AQ+H+ METQ ++ P EDG+ I+ ++Q DL A+ K L M
Sbjct: 1350 MKSSSHVVTGEVSCGAQHHFHMETQVALTVPGEDGITIFCASQGTDLIQSAVCKVLGMPA 1409
Query: 382 --------------PVNSINIIVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILP 519
PV S++++ RR GG +G+K TRA+ IACA+AL + L R R +
Sbjct: 1410 KKDHTPNQSPIFVCPVCSVDVVTRRCGGAFGAKATRAAPIACASALAAKILDRPVRLKMN 1469
Query: 520 LQTNMKAIGKRIP 558
N+++IG R P
Sbjct: 1470 FNKNLESIGGRSP 1482
>SB_53911| Best HMM Match : Ald_Xan_dh_C2 (HMM E-Value=0)
Length = 817
Score = 78.2 bits (184), Expect = 4e-15
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Frame = +1
Query: 28 ARGIIVADREKTATKLLDLSKSKYDFVNKEKPLLTIDEVL--NSPKRKTLVRQDMTVQPT 201
A G +VA+ + A + K +Y+ + + +LTI++ + NS L ++ ++
Sbjct: 106 AIGAVVAETQAQAQRAAKAVKIEYEDLPR---ILTIEDAIAANSFIDPPLKMENGDLEAG 162
Query: 202 DSGSDISTVIEGSMKIHAQYHYTMETQTSVATPT-EDG-LEIYSSTQWLDLTNIAIAKCL 375
SD VIEG M+ AQ H+ +ET ++A P EDG +E++ STQ T +A L
Sbjct: 163 FRASD--HVIEGEMRTGAQEHFYLETHATIAVPKGEDGEMELFCSTQNPTTTQSMVAAVL 220
Query: 376 DMPVNSINIIVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRI 555
+ N I + V+R+GGG+G K TR+ ++ A+ G+ R +L +MK G R
Sbjct: 221 GVQRNRIVVRVKRMGGGFGGKETRSCWLSAVVAVAASRTGKPVRCMLDRDEDMKTGGTRH 280
Query: 556 P 558
P
Sbjct: 281 P 281
>SB_27644| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=3.1e-26)
Length = 274
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +1
Query: 361 IAKCLDMPVNSINIIVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKA 540
+A+ L +P++ + I +R+GG +G K+T S IA A+V + GR R L ++K
Sbjct: 174 VARNLGVPLSKVVIRTKRVGGAFGGKLTNGSAIAATVAVVAQKSGRAARLALSQTEDIKT 233
Query: 541 IGKR 552
GKR
Sbjct: 234 TGKR 237
>SB_40646| Best HMM Match : eIF-5a (HMM E-Value=0.87)
Length = 209
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 1 VDPPGCRNSARGIIVADREKTATKLLDLSKSKYDFVNKEKPLLTIDEVLNSPKRKTLVRQ 180
VDPPGCRNS + + K+LD+ K ++ EK + ++L +++ VRQ
Sbjct: 16 VDPPGCRNSIKR-TQQQLDDIHDKMLDMRKRVFELETNEK---CMQQLLQEREKELQVRQ 71
Query: 181 D 183
+
Sbjct: 72 N 72
>SB_30599| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=7.7e-35)
Length = 255
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 28 ARGIIVADREKTATKLLDLSKSKYDFVNKEKPLLTIDEVLNSPKRKTLVRQDMTVQPTDS 207
A G+I+AD ++ A K + K Y + P+L+I + + + MTV +
Sbjct: 173 AIGLILADSQRHADKAAEAVKVVYKDI--ATPILSIKAAIAAKSFFPAIAP-MTVGDAEG 229
Query: 208 G-SDISTVIEGSMKIHAQYHYTMETQ 282
S VI G + + Q+H+ METQ
Sbjct: 230 AIKAASHVISGEIAMDTQHHFHMETQ 255
>SB_26655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 1 VDPPGCRNSARGIIVADREKTATK 72
VDPPGCRNS +AD EK T+
Sbjct: 16 VDPPGCRNSILLTELADYEKNVTR 39
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 175 RQDMTVQPTDSGSDISTVIEGSMKIHAQYHYTMETQTSVATPTEDGLEIYSSTQWLDLTN 354
R+DM + P+DS S S +IE + + T + QT D + + T + N
Sbjct: 140 REDMELSPSDSNSGESCIIEKADSSACRCPTTTDQQTQ----RSDRSDYFPETHNKTIEN 195
Query: 355 IAIAKCLDM-PVNSINI 402
+AI K M P +N+
Sbjct: 196 VAINKLTGMIPFFPLNV 212
>SB_53036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +1
Query: 70 KLLDLSKSKYDFVNKEKPLLTIDEVLNSPKRKTLVRQDMTVQPTDSGSDISTVIEGSMKI 249
K+L L + D + + LTI+ +LN +KT + ++ S ++ V+ +M
Sbjct: 534 KILKLGSASLDITHTTE--LTIEAILNDAYKKTSPSSTPQTKSYNASSAVTPVMRKAMYT 591
Query: 250 -HAQY--HYTMETQTSVATPTEDGLE 318
H Y H T A+P G E
Sbjct: 592 PHQMYTPHQHSPLMTPCASPLSQGFE 617
>SB_42734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 1 VDPPGCRNSARGIIVADREK 60
VDPPGCRNS V ++EK
Sbjct: 16 VDPPGCRNSIAQCRVLNKEK 35
>SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 1 VDPPGCRNSARGIIVADREKTATKLLDLSKSKYDFVNKEKPLLTIDEVLNSPKR 162
VDPPGCRNS + A + K A K + + +KP L + SPK+
Sbjct: 16 VDPPGCRNSMKP--AAKKPKAAKKPAAKTTPSKKAKSPKKPAL--KKATKSPKK 65
>SB_3996| Best HMM Match : Connexin (HMM E-Value=2.4)
Length = 205
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 1 VDPPGCRNSARGIIVADREKTATKLLDLSKSKYD 102
VDPPGCRNS I + K K +K D
Sbjct: 16 VDPPGCRNSMDDIALLSSTKDREKKTKEKTAKLD 49
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 1 VDPPGCRNSARGIIVAD 51
VDPPGCRNS G V+D
Sbjct: 33 VDPPGCRNSIDGNGVSD 49
>SB_18592| Best HMM Match : DUF1298 (HMM E-Value=0.85)
Length = 282
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -1
Query: 306 LSRSCHRCLRFHRIMVLCMNFHRAFNYSAY-----IGS*VSWLNCHILPYE 169
LS+ CHR + +C A N A I S +SWLN H+LP+E
Sbjct: 192 LSKHCHRDIT-SAFWGICSGSEMAKNKHAQRIMDRILSDLSWLNIHLLPHE 241
>SB_10104| Best HMM Match : DUF1298 (HMM E-Value=0.85)
Length = 282
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -1
Query: 306 LSRSCHRCLRFHRIMVLCMNFHRAFNYSAY-----IGS*VSWLNCHILPYE 169
LS+ CHR + +C A N A I S +SWLN H+LP+E
Sbjct: 192 LSKHCHRDIT-SAFWGICSGSEMAKNKHAQRIMDRILSDLSWLNIHLLPHE 241
>SB_6602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -2
Query: 464 QAI*LARVILLPYPPPNRRTMMLILLTGISKHFAIAML 351
+AI R++ P+PPP + + L +S+H + L
Sbjct: 23 KAICCGRMVECPFPPPGSKASHKVKLIDVSRHIKVCPL 60
>SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06)
Length = 183
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 1 VDPPGCRNSARGI 39
VDPPGCRNS R +
Sbjct: 16 VDPPGCRNSIRTV 28
>SB_40500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1
Query: 1 VDPPGCRNSARG 36
VDPPGCRNS G
Sbjct: 16 VDPPGCRNSIEG 27
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1
Query: 199 TDSGSDIS----TVIEGSMKIHAQYHYTMETQTSVATPTEDGLEIYSST 333
T +G D S T ++ ++H T ET+TS T+ GL +ST
Sbjct: 183 TSTGIDTSIHHLTTTSTALATSTRHHVTTETETSTLVTTKTGLAYVTST 231
>SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1)
Length = 1139
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 77 WTCQNRSMILSTKKNPY*PLTKSSI 151
W C S+ILS++K P P+T ++I
Sbjct: 1051 WNCHTNSVILSSRKRPA-PITTTTI 1074
>SB_21491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 1 VDPPGCRNSARGIIVADREKTATKLLDLSK 90
VDPPGCRNS +V+ + + DL K
Sbjct: 16 VDPPGCRNSMFDTLVSLGDLDYSNSKDLQK 45
>SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1
Query: 1 VDPPGCRNSAR 33
VDPPGCRNS R
Sbjct: 16 VDPPGCRNSIR 26
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1
Query: 1 VDPPGCRNSARG 36
VDPPGCRNS G
Sbjct: 92 VDPPGCRNSIAG 103
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1
Query: 1 VDPPGCRNSARG 36
VDPPGCRNS G
Sbjct: 103 VDPPGCRNSITG 114
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,852,549
Number of Sequences: 59808
Number of extensions: 360481
Number of successful extensions: 2387
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2386
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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