Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0395
         (570 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr...    81   4e-16
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...    81   4e-16
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...    60   1e-09
AC006603-6|ABB51200.1|  534|Caenorhabditis elegans Hypothetical ...    29   3.1  
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote...    27   7.2  
AF125959-4|AAD14730.2|  532|Caenorhabditis elegans Udp-glucurono...    27   9.5  

>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical protein
            F55B11.1 protein.
          Length = 1358

 Score = 81.4 bits (192), Expect = 4e-16
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
 Frame = +1

Query: 40   IVADREKTATKLLDLSKSKYDFVNKEKPLLTIDEVLNSPK---RKTLVRQDMTVQPTDSG 210
            IVA   + A K   L K  Y     EKP++TI + L +     +  ++   +        
Sbjct: 692  IVATDHEIARKAASLVKLDYSV---EKPIVTIKQALEAESFVFKHFVIHSSLNDNEQVIK 748

Query: 211  SDIST---VIEGSMKIHAQYHYTMETQTSVATPTEDG-LEIYSSTQWLDLTNIAIAKCLD 378
            SD S    ++EGS+ +  Q H+ +ETQ  +  P ED  LEI  S Q ++   I +AKCL 
Sbjct: 749  SDWSKYDRIVEGSIDMGGQEHFYLETQQCIVIPHEDDELEIIISNQCVNDVQIEVAKCLG 808

Query: 379  MPVNSINIIVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIP 558
            M  + I+  V+R+GGG+G K +  + +A  A+L  +  GR  +F      +M   G R P
Sbjct: 809  MAQHKISTKVKRIGGGFGGKESTGAILAVPASLAAKKFGRPMKFKFERFDDMAITGTRHP 868


>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
           protein B0222.9 protein.
          Length = 1217

 Score = 81.4 bits (192), Expect = 4e-16
 Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
 Frame = +1

Query: 202 DSGSDISTVIEGSMKIHAQYHYTMETQTSVATPTE-DGLEIYSSTQWLDLTNIAIAKCLD 378
           +S  + S V+EG   I  Q HY +ETQ+S+  P E D L +  STQ    T + +A+ + 
Sbjct: 632 ESLENSSKVLEGECDIGGQEHYYLETQSSLVIPGEGDELIVNCSTQGTSFTQLMVAETMK 691

Query: 379 MPVNSINIIVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKR 552
           +P + I +  +RLGGG+G K+  AS IAC  A+V + L R     L    ++   GKR
Sbjct: 692 IPAHKIIVKTKRLGGGFGGKVNNASWIACMCAIVAKKLNRPTYGFLSRADDLAITGKR 749


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
           protein F15E6.6 protein.
          Length = 1228

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 29/91 (31%), Positives = 52/91 (57%)
 Frame = +1

Query: 226 VIEGSMKIHAQYHYTMETQTSVATPTEDGLEIYSSTQWLDLTNIAIAKCLDMPVNSINII 405
           V+EG   + +Q H+ +ETQ+S+         ++ STQ    T + +A+ + +P + I + 
Sbjct: 678 VLEGESSLGSQEHFYLETQSSLNYRI-----VHCSTQGTSFTQLMVAETMKIPAHKIIVK 732

Query: 406 VRRLGGGYGSKITRASQIACAAALVTRFLGR 498
            +R+GG +G K+  AS IAC  ++V + L R
Sbjct: 733 TKRMGGAFGGKLNNASWIACICSVVAKKLNR 763


>AC006603-6|ABB51200.1|  534|Caenorhabditis elegans Hypothetical
           protein B0524.1 protein.
          Length = 534

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = +3

Query: 15  LQEFGTRHNCSR*RKNSNKAAGLVKIEV*FCQQRKTLTDH*RSPQFPQTENSRKARY 185
           LQEF  +      +K    A    KI V  C +RKT T + R  + P+T+N RK  +
Sbjct: 165 LQEFPIKIEQFPVKKREKTAKNWRKIAVLVCFKRKTTTKN-RYLRRPKTKNQRKIEF 220


>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
            UNC-53 protein.
          Length = 1583

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 100  DFVNKEKPLLTIDEVLNSPKRKTLVRQDMTVQPTDSGSDISTVIEGSMKIHAQYHYTME 276
            D V+K+ P    +   N  KR  L  QD+   P +S       +E  +++HA  H T++
Sbjct: 1525 DIVSKKWPWFDGENPENVLKRLQL--QDLVPSPANSSRQHFNPLESLIQLHATKHQTID 1581


>AF125959-4|AAD14730.2|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein13 protein.
          Length = 532

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +1

Query: 82  LSKSKYDFVNKEKPLLTIDEVLNSPKRK---TLVRQDMTVQPTDSGSDISTVIEGSMK 246
           ++ SK+D  N EK   T+ +++ +PK K    L+   ++ QP D   +    +E +MK
Sbjct: 417 IAYSKFDLANGEKLANTVKDMVFNPKYKEKAELLFDVLSNQPIDPKENFIKHLEFAMK 474


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,259,282
Number of Sequences: 27780
Number of extensions: 269294
Number of successful extensions: 671
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)