Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0392
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...   137   7e-35
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...   137   7e-35
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...   128   2e-32
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...   126   1e-31
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.1  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   9.1  

>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score =  137 bits (331), Expect = 7e-35
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 225 IQKESTLH 248
           IQKESTLH
Sbjct: 61  IQKESTLH 68


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score =  137 bits (331), Expect = 7e-35
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 225 IQKESTLH 248
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  137 bits (331), Expect = 7e-35
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 225 IQKESTLH 248
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  137 bits (331), Expect = 7e-35
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 225 IQKESTLH 248
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  137 bits (331), Expect = 7e-35
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 225 IQKESTLH 248
           IQKESTLH
Sbjct: 289 IQKESTLH 296



 Score =  137 bits (331), Expect = 7e-35
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 225 IQKESTLH 248
           IQKESTLH
Sbjct: 365 IQKESTLH 372



 Score =  137 bits (331), Expect = 7e-35
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 225 IQKESTLH 248
           IQKESTLH
Sbjct: 517 IQKESTLH 524



 Score =  137 bits (331), Expect = 7e-35
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 225 IQKESTLH 248
           IQKESTLH
Sbjct: 593 IQKESTLH 600



 Score =  137 bits (331), Expect = 7e-35
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 225 IQKESTLH 248
           IQKESTLH
Sbjct: 669 IQKESTLH 676



 Score =  134 bits (325), Expect = 4e-34
 Identities = 65/68 (95%), Positives = 66/68 (97%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440

Query: 225 IQKESTLH 248
           IQKESTLH
Sbjct: 441 IQKESTLH 448


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score =  128 bits (310), Expect = 2e-32
 Identities = 62/64 (96%), Positives = 63/64 (98%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 225 IQKE 236
           IQKE
Sbjct: 61  IQKE 64


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score =  126 bits (304), Expect = 1e-31
 Identities = 61/64 (95%), Positives = 62/64 (96%)
 Frame = +3

Query: 45  MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
           MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 49  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108

Query: 225 IQKE 236
           IQKE
Sbjct: 109 IQKE 112



 Score = 87.4 bits (207), Expect = 7e-20
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = +3

Query: 129 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 248
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
Sbjct: 1   KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 40


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/15 (53%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
 Frame = -2

Query: 199  SSNCF-PAKMRRCWS 158
            S+ CF P+K+R CW+
Sbjct: 1112 SNRCFFPSKIRICWN 1126


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 158 RPTTSHLCRETIRRWPHSFRL*HPERIHT 244
           +P    +C+   R++  S+ L   ER HT
Sbjct: 75  KPKRQFICKYCNRQFTKSYNLLIHERTHT 103


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 176 DETLLVWRNTFLVLDFSF 123
           D  ++  R +FLV DF F
Sbjct: 479 DAAMMALRTSFLVNDFGF 496


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 276 CTSSKSQNHGEVWILSGCYSLK 211
           C S+  QN G    L G YS K
Sbjct: 188 CDSAPCQNGGTCLDLIGSYSCK 209


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 281 SIVPPLSLKTTVKCGFFLDV 222
           SI PPL +   +  GFFL+V
Sbjct: 559 SIGPPLVIPFLLFGGFFLNV 578


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 281 SIVPPLSLKTTVKCGFFLDV 222
           SI PPL +   +  GFFL+V
Sbjct: 559 SIGPPLVIPFLLFGGFFLNV 578


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 23  PGLQEQHNANIRQNPY 70
           PG   + N  IR+ PY
Sbjct: 123 PGFTTERNWEIREKPY 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,302
Number of Sequences: 336
Number of extensions: 2851
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)