Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0392
(536 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 6e-33
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 6e-33
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 137 6e-33
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 137 6e-33
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 129 1e-30
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 115 2e-26
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 73 1e-13
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 48 5e-06
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 47 8e-06
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 41 7e-04
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 38 0.007
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.016
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_44917| Best HMM Match : DUF156 (HMM E-Value=3) 35 0.048
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.064
SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07) 34 0.085
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.15
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.34
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_36239| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 29 1.8
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 29 2.4
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 29 3.2
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 29 3.2
SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0) 29 3.2
SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07) 28 4.2
SB_34250| Best HMM Match : DUF1168 (HMM E-Value=1.3) 28 5.6
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 27 7.3
SB_39538| Best HMM Match : VWA (HMM E-Value=0) 27 7.3
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 27 7.3
SB_4877| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 27 9.7
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 441 IQKESTLH 448
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 517 IQKESTLH 524
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 365 IQKESTLH 372
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 137 bits (331), Expect = 6e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 79.4 bits (187), Expect = 2e-15
Identities = 39/68 (57%), Positives = 53/68 (77%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQI VK KT TL+VEAS+T+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYN
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYN 135
Query: 225 IQKESTLH 248
I++ S LH
Sbjct: 136 IKQGSILH 143
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 36 SNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 215
++TMQIFVKTLTGKTITLEVE S+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 76 TSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 135
Query: 216 DYNIQK 233
DYNIQK
Sbjct: 136 DYNIQK 141
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 115 bits (277), Expect = 2e-26
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +1
Query: 250 VVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 414
+VLRLRGG IEPSLRILA KYNC+KMICRKCYARLHPRATNCRK KCGH+NNLRP
Sbjct: 19 LVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHSNNLRP 73
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 72.9 bits (171), Expect = 1e-13
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +3
Query: 150 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 248
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 34
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +1
Query: 229 RKNPHFTVVLRLRGGTIEPSLRILAMKYNCEKMICR 336
+K +VLRLRGG IEPSLRILA KYNC+KMICR
Sbjct: 28 QKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICR 63
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 57.6 bits (133), Expect = 6e-09
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 250 VVLRLRGGTIEPSLRILAMKYNCEKMICR 336
+VLRLRGG IEPSLRILA KYNC+KMICR
Sbjct: 19 LVLRLRGGVIEPSLRILAQKYNCDKMICR 47
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 48.0 bits (109), Expect = 5e-06
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 51 IFVKTLTGKTITLEVEASE-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 227
I V TLTG+ I + ++ + TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 228 QKESTLH 248
+TLH
Sbjct: 133 FAGATLH 139
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 47.2 bits (107), Expect = 8e-06
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 33 RSNTMQIFVKTLTGKTITLEVEASETIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDG 203
+S M I KTL +T +E+ ET+ +K KI+ K+ P +LI+AGK L D
Sbjct: 63 KSVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDD 122
Query: 204 RTLSDYNIQKES 239
L +YNI ++S
Sbjct: 123 NPLKEYNIDEKS 134
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 40.7 bits (91), Expect = 7e-04
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 42 TMQIFVKTLTGKTITL-EVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 218
T Q+F T TL ++ + +K++I+ K GIP D QRL F K+L D TL+
Sbjct: 5 TFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAK 64
Query: 219 YNIQK 233
N+++
Sbjct: 65 VNLKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 221
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 222 NIQKESTL 245
++++ +
Sbjct: 61 SVKENDVI 68
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.016
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 35.5 bits (78), Expect = 0.028
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKE 146
M ++++TLTG L V ETI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_44917| Best HMM Match : DUF156 (HMM E-Value=3)
Length = 1198
Score = 34.7 bits (76), Expect = 0.048
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 91 RWKLPRLSKMSKLKSKTRKVFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTVVLRLRG 270
RW P L +++K K ++ L+ GN + L +T+TS T V++ +G
Sbjct: 544 RWATPFLQRVNKCKPGSQTSLLRQYLTDIAKGNKKEAQELMKTLTSLTAKR-TPVVKEKG 602
Query: 271 --GTIEPSLRILAMKYNC-EKMICRKCYA 348
++ LR+ YNC + +C + YA
Sbjct: 603 WQALLKDMLRLQEKTYNCIDTSVCYEIYA 631
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 34.3 bits (75), Expect = 0.064
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 69 TGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 233
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRE 98
>SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07)
Length = 642
Score = 33.9 bits (74), Expect = 0.085
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -3
Query: 444 GYYLILDLLFGSQIVSVSALCLATVGSTRMKTGIAFTANHF 322
G +++ LL G+ V +S+LC A GS KTG ++T +F
Sbjct: 19 GPAIVISLLIGAIPVCLSSLCYAEFGSRISKTGSSYTYTYF 59
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 147 GIPPDQQRLIFAGKQLEDGRTLSDYN 224
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.34
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +3
Query: 51 IFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 230
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 231 KEST 242
+++T
Sbjct: 245 QKAT 248
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 72 GKTITLEVE-ASETIENVKAKIQDKEGIPPDQQRLIFAGKQLED 200
G T E+E A E++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 20 IPGLQEQHNANIRQNPYGEDHYI--GGGSFRDY 112
+ G + HNA I++N G D+Y+ GGG + +Y
Sbjct: 180 VKGTRFTHNAPIKRNCSGNDYYVKAGGGVYFEY 212
>SB_36239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Frame = +1
Query: 82 LHWRWK-LPRLSKM-SKLKSKTRKVFLQTNNVSSLPGNN*KMAALFQT----ITSRKNPH 243
+++ WK +P+ + + +KL +T++ + TN+ LPG K +F++ I S
Sbjct: 274 IYFSWKRVPKANTLGTKLAGRTQRFYFDTNSGVILPGETLKFPFIFKSLNAGIFSENWEL 333
Query: 244 FTVVLRLRGGTIEPSLRILAMK 309
T + GG I LR +A++
Sbjct: 334 LTEPVLCGGGAIRVCLRGIAIE 355
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 108 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTL 245
T+ ++K + +K G+ RL+ GK++ D L DYNI T+
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTI 132
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +3
Query: 54 FVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 233
FV G+ ITL ++ ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 234 ESTL 245
+TL
Sbjct: 229 GATL 232
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/62 (24%), Positives = 35/62 (56%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
+Q ++T GKTI L E E ++ + ++K+G+ + ++L + ++L+ T ++
Sbjct: 714 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEK 773
Query: 225 IQ 230
+Q
Sbjct: 774 LQ 775
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 208 LFQTITSRKNPHFTVVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARL 354
L +++T+++ PH RG E +L + +YN K+I R CY L
Sbjct: 1942 LTRSVTAKEGPHDIA----RGMAAERTLSEIKTRYNHTKLIYRPCYFSL 1986
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 361 EDEDGHSIYGKSFSHSYTSWRECEGKV 281
++E I SFS T WR CEG++
Sbjct: 775 DEEMNQVIISSSFSAKLTKWRVCEGQI 801
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
+Q ++T GKTI L E E ++ + ++K+G+ + + L + ++L+ T ++
Sbjct: 10 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDTEEK 69
Query: 225 IQ 230
+Q
Sbjct: 70 LQ 71
>SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 746
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 411 SQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKG 286
S + LC+ +G+ + GIAF A L ++ G+NA+G
Sbjct: 252 SLLAQTLKLCIPKIGAFVIVYGIAFFAYAQLACLVFGQNAEG 293
>SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07)
Length = 503
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 313 NCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 414
N + ++CR C R +P KC +T N RP
Sbjct: 347 NADYVLCRYCQRRFNPTVAERHIPKCANTTN-RP 379
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 313 NCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 414
N + ++CR C R +P KC +T N RP
Sbjct: 435 NPDYVLCRYCQRRFNPTVAERHIPKCANTTN-RP 467
>SB_34250| Best HMM Match : DUF1168 (HMM E-Value=1.3)
Length = 642
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 46 CKYSSKPLRGRPLHWRWKLPRLSKMSKLKSKTRKV 150
CK+ L+ + + +LPRL K S+L+ K K+
Sbjct: 466 CKHPGTSLKNKARDYYKRLPRLLKTSELREKAAKL 500
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 300 ENAKGRFNCTSSKSQNHGEVWILSGCYSLKECGHLLI 190
+ AKG N TSSK + ++L G Y K GH L+
Sbjct: 284 QGAKGLMNSTSSKLKIVSGPYVLDGLYP-KHQGHYLV 319
>SB_39538| Best HMM Match : VWA (HMM E-Value=0)
Length = 3208
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 199 MAALFQTITSRKNPHFTVVLRLRGGTIEPSLRILAMKYNCEKMIC 333
M +LF+T R PH V++ T +PSL ++ + ++ C
Sbjct: 309 MKSLFKTSKRRSIPHILVLITAGKSTGDPSLNAEELRASGVRLFC 353
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 128 SFDIFDSLGSFHLQCNGLPRKGFDEYLHCVAP 33
S DIF++L +FH Q D+ + C+ P
Sbjct: 476 STDIFETLSNFHSQIGPKKTSNADDGITCIVP 507
>SB_4877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 128 SFDIFDSLGSFHLQCNGLPRKGFDEYLHCVAP 33
S DIF++L +FH Q D+ + C+ P
Sbjct: 457 STDIFETLSNFHSQIGPKKTSNADDGITCIVP 488
>SB_1963| Best HMM Match : rve (HMM E-Value=0.022)
Length = 931
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 57 VKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 227
+ +L G I +++A IP DQ L F + LEDGR Y +
Sbjct: 533 LNSLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLRFLWRDLEDGRRPDVYQM 589
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,606,996
Number of Sequences: 59808
Number of extensions: 366736
Number of successful extensions: 1017
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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