BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0392
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 139 1e-33
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 139 1e-33
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 139 1e-33
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 139 1e-33
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 139 1e-33
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 86 1e-17
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 79 3e-15
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 3e-14
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 62 3e-10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 62 3e-10
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 55 3e-08
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 46 1e-05
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 44 5e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 43 2e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 37 0.008
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 37 0.011
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 36 0.018
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 35 0.032
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 35 0.043
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 35 0.043
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.13
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 30 0.92
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 1.6
U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate trans... 27 6.5
U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate trans... 27 6.5
U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein. 27 6.5
U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein. 27 6.5
D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate trans... 27 6.5
D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate trans... 27 6.5
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 97.9 bits (233), Expect = 4e-21
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +1
Query: 229 RKNPHFTVVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNL 408
+K +VLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++ L
Sbjct: 62 QKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSEL 121
Query: 409 R 411
R
Sbjct: 122 R 122
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 136 bits (330), Expect = 7e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTL GKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 441 IQKESTLH 448
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAG 185
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 517 IQKESTLH 524
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 593 IQKESTLH 600
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 669 IQKESTLH 676
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 745 IQKESTLH 752
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 821 IQKESTLH 828
Score = 136 bits (330), Expect = 7e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTL GKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 441 IQKESTLH 448
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 441 IQKESTLH 448
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 517 IQKESTLH 524
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 593 IQKESTLH 600
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 669 IQKESTLH 676
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 745 IQKESTLH 752
Score = 138 bits (333), Expect = 3e-33
Identities = 66/68 (97%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 225 IQKESTLH 248
IQK+STLH
Sbjct: 821 IQKQSTLH 828
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 139 bits (336), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 97.9 bits (233), Expect = 4e-21
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +1
Query: 229 RKNPHFTVVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNL 408
+K +VLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++ L
Sbjct: 62 QKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSEL 121
Query: 409 R 411
R
Sbjct: 122 R 122
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 86.2 bits (204), Expect = 1e-17
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
M I VKTLTGK I L++E ++ +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 225 IQKESTLH 248
+ S LH
Sbjct: 61 VLGGSVLH 68
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 78.6 bits (185), Expect = 3e-15
Identities = 34/68 (50%), Positives = 49/68 (72%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
+ + VKTL GKTI + ++ ++T+E +K K+Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 225 IQKESTLH 248
I+ E +H
Sbjct: 221 IRDEDIIH 228
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 36 SNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGI 152
S TM + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 56 SKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +3
Query: 66 LTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 245
+TG IT VEAS+ I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.9 bits (176), Expect = 3e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIP 155
MQIFVKTLTGKTITLEVEAS+TIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 61.7 bits (143), Expect = 3e-10
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = +3
Query: 51 IFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 230
+FVKTL +T+ LEV A+E + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 231 KESTLHRGFE 260
E+T++ E
Sbjct: 57 SEATIYVNLE 66
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 61.7 bits (143), Expect = 3e-10
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = +3
Query: 51 IFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 230
+FVKTL +T+ LEV A+E + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 231 KESTLHRGFE 260
E+T++ E
Sbjct: 57 SEATIYVNLE 66
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 55.2 bits (127), Expect = 3e-08
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = +3
Query: 48 QIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 227
QIFVK L G + ++ +T+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 228 QKESTLHRGFET 263
QK ST+ F +
Sbjct: 214 QKSSTITMYFRS 225
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/46 (47%), Positives = 34/46 (73%)
Frame = +3
Query: 51 IFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGK 188
+FVKTL +T+ LEV A+E + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLS 215
++I+V+ G+T TL+ AS+T+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 216 DYNIQKESTL 245
D + + STL
Sbjct: 162 DNSFENGSTL 171
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGI 152
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEV 95
+ +FVKT TGKTIT+ +
Sbjct: 181 IDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/70 (38%), Positives = 36/70 (51%)
Frame = +3
Query: 48 QIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 227
Q FV+ L GKT TL V AS+T+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 228 QKESTLHRGF 257
ST+ F
Sbjct: 99 SNNSTMDLHF 108
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +3
Query: 69 TGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 245
+G L V S+TI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTL 239
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +3
Query: 87 LEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 245
L V S+TI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEG--IPPDQQRLIFAGKQLED 200
+ + +TLT LE+ +TI VKA + ++G P+ Q+LI+ GK L+D
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 87 LEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 233
L V S+TI ++K +I + R++ GK LED +L+ YNIQ+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQE 258
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.9 bits (79), Expect = 0.018
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +3
Query: 63 TLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 221
++ G+ ++ E++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 35.1 bits (77), Expect = 0.032
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 75 KTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTL 245
K I +E++ ET+ +K +I+ + + ++Q L+F G +L+D +T++D I ++ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 34.7 bits (76), Expect = 0.043
Identities = 13/61 (21%), Positives = 34/61 (55%)
Frame = +3
Query: 66 LTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 245
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 246 H 248
+
Sbjct: 644 Y 644
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 34.7 bits (76), Expect = 0.043
Identities = 13/61 (21%), Positives = 34/61 (55%)
Frame = +3
Query: 66 LTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 245
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 246 H 248
+
Sbjct: 644 Y 644
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 60 KTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 227
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSL 68
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 30.3 bits (65), Expect = 0.92
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +3
Query: 18 GSPGCRSNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLE 197
G+ + +Q+ + + TGK++ + VE E +E D+EG+ L+ + ++ +
Sbjct: 1140 GAEKIGEDVLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQ 1199
Query: 198 D 200
+
Sbjct: 1200 E 1200
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 331 CRKCYARLHPRATNCRKTKCGHT 399
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 221
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 222 NIQK 233
IQ+
Sbjct: 56 KIQE 59
>U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate
transporter family protein1, isoform b protein.
Length = 492
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 106 SEASTSNVMVFPVRVLTNICIVLLLQPGDPLV 11
S A T + V V+T I +VL++ PGDP +
Sbjct: 81 SLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTI 112
>U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate
transporter family protein1, isoform a protein.
Length = 503
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 106 SEASTSNVMVFPVRVLTNICIVLLLQPGDPLV 11
S A T + V V+T I +VL++ PGDP +
Sbjct: 92 SLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTI 123
>U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein.
Length = 492
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 106 SEASTSNVMVFPVRVLTNICIVLLLQPGDPLV 11
S A T + V V+T I +VL++ PGDP +
Sbjct: 81 SLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTI 112
>U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein.
Length = 503
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 106 SEASTSNVMVFPVRVLTNICIVLLLQPGDPLV 11
S A T + V V+T I +VL++ PGDP +
Sbjct: 92 SLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTI 123
>D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 106 SEASTSNVMVFPVRVLTNICIVLLLQPGDPLV 11
S A T + V V+T I +VL++ PGDP +
Sbjct: 92 SLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTI 123
>D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 106 SEASTSNVMVFPVRVLTNICIVLLLQPGDPLV 11
S A T + V V+T I +VL++ PGDP +
Sbjct: 92 SLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTI 123
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 87 LEVEASETIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 248
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIY 154
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 75 KTITLEVEASETIENVKAKIQDKEGIPPDQQRL 173
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,239,341
Number of Sequences: 27780
Number of extensions: 265219
Number of successful extensions: 814
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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