Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0392
(536 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 135 2e-32
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 135 2e-32
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 135 2e-32
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 135 2e-32
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 135 2e-32
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 135 2e-32
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 135 2e-32
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 135 2e-32
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 135 2e-32
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 135 2e-32
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 135 2e-32
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 135 2e-32
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 134 4e-32
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 134 5e-32
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 125 2e-29
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 111 2e-25
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 81 5e-16
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 8e-12
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 66 1e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 57 9e-09
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 52 3e-07
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 50 1e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 50 1e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 1e-06
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 50 1e-06
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 49 2e-06
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 48 5e-06
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 46 2e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 46 2e-05
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 46 2e-05
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 45 4e-05
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 45 4e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 44 5e-05
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 43 1e-04
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 43 1e-04
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 43 1e-04
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 43 1e-04
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 43 1e-04
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 43 1e-04
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 42 2e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 42 3e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 41 5e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 40 0.001
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 38 0.003
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 38 0.004
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 37 0.007
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.013
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 36 0.017
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.052
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 33 0.091
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.16
At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam ... 31 0.49
At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam ... 31 0.49
At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam ... 31 0.49
At3g27473.1 68416.m03434 DC1 domain-containing protein contains ... 31 0.64
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ... 29 2.6
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 28 3.4
At4g38760.1 68417.m05489 hypothetical protein KIAA0169 gene, Hom... 28 4.5
At4g16070.1 68417.m02437 lipase class 3 family protein low simil... 27 6.0
At2g19180.1 68415.m02238 expressed protein 27 6.0
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 27 7.9
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 27 7.9
At3g28650.1 68416.m03576 DC1 domain-containing protein similar ... 27 7.9
At3g27490.1 68416.m03437 DC1 domain-containing protein contains ... 27 7.9
At2g33080.1 68415.m04056 leucine-rich repeat family protein cont... 27 7.9
At2g33050.1 68415.m04053 leucine-rich repeat family protein cont... 27 7.9
At1g58190.1 68414.m06605 leucine-rich repeat family protein cont... 27 7.9
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 365 IQKESTLH 372
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKE 146
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 124 KLKSKTRKVFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFT 249
K K + ++VFL+T++VSS ++ +M L+ T TSR++ FT
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFT 296
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKE 146
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 124 KLKSKTRKVFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFT 249
K K + ++VFL+T++VSS ++ +M L+ T TSR++ FT
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFT 448
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKE 146
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 124 KLKSKTRKVFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFT 249
K K + ++VFL+T++VSS ++ +M L+ T TSR++ FT
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFT 372
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKE 146
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 124 KLKSKTRKVFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFT 249
K K + ++VFL+T++VSS ++ +M L+ T TSR++ FT
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFT 448
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKE 146
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 124 KLKSKTRKVFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFT 249
K K + ++VFL+T++VSS ++ +M L+ T TSR++ FT
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFT 372
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 289 IQKESTLH 296
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 102 bits (244), Expect = 2e-22
Identities = 45/62 (72%), Positives = 50/62 (80%)
Frame = +1
Query: 229 RKNPHFTVVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNL 408
+K +VLRLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N L
Sbjct: 62 QKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 121
Query: 409 RP 414
RP
Sbjct: 122 RP 123
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 102 bits (244), Expect = 2e-22
Identities = 45/62 (72%), Positives = 50/62 (80%)
Frame = +1
Query: 229 RKNPHFTVVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNL 408
+K +VLRLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N L
Sbjct: 62 QKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 121
Query: 409 RP 414
RP
Sbjct: 122 RP 123
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 85.4 bits (202), Expect = 2e-17
Identities = 40/72 (55%), Positives = 54/72 (75%)
Frame = +3
Query: 33 RSNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 212
R TM I VKTLTGK I +++E ++TI+ +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 74 RGGTM-IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTA 132
Query: 213 SDYNIQKESTLH 248
DY I+ S LH
Sbjct: 133 KDYAIEGGSVLH 144
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 132 bits (319), Expect = 1e-31
Identities = 63/68 (92%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 212 IQKESTLH 219
Score = 128 bits (309), Expect = 2e-30
Identities = 63/68 (92%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 136 IQKESTLH 143
Score = 101 bits (242), Expect = 3e-22
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 203
MQIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/72 (56%), Positives = 55/72 (76%)
Frame = +3
Query: 33 RSNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 212
R TM I VKTLTGK I +++E ++TI+ +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 74 RGGTM-IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTA 132
Query: 213 SDYNIQKESTLH 248
DYNI+ S LH
Sbjct: 133 KDYNIEGGSVLH 144
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 135 bits (327), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 61 IQKESTLH 68
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 134 bits (324), Expect = 4e-32
Identities = 63/68 (92%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 129 bits (312), Expect = 1e-30
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 121 bits (291), Expect = 4e-28
Identities = 56/68 (82%), Positives = 64/68 (94%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIF+KTLTGKT LEVE+S+TI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 225 IQKESTLH 248
+Q++STLH
Sbjct: 61 VQEDSTLH 68
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 134 bits (323), Expect = 5e-32
Identities = 62/68 (91%), Positives = 68/68 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVKTLTGKTITLEVE+S+TI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 139 IQKESTLH 146
Score = 127 bits (306), Expect = 5e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFV+TLT KTI LEVE+S+T +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 215 IQKESTLH 222
Score = 118 bits (284), Expect = 2e-27
Identities = 59/69 (85%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDY 221
MQIFV TLTGKTITLEVE+S+TI+NVKAKIQDKE I PDQQRLIFAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 222 NIQKESTLH 248
NIQKESTLH
Sbjct: 291 NIQKESTLH 299
Score = 104 bits (250), Expect = 3e-23
Identities = 50/69 (72%), Positives = 60/69 (86%)
Frame = +3
Query: 42 TMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 221
+MQI KTLT KTIT++V +S+TI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY
Sbjct: 2 SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61
Query: 222 NIQKESTLH 248
+IQK+S LH
Sbjct: 62 SIQKDSILH 70
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 125 bits (301), Expect = 2e-29
Identities = 60/68 (88%), Positives = 66/68 (97%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFV+TLTGKTITLEV++S+TI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 225 IQKESTLH 248
IQKESTLH
Sbjct: 139 IQKESTLH 146
Score = 117 bits (281), Expect = 6e-27
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = +3
Query: 42 TMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 221
T+QI+ KTLT KTITL+VE S++I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DY
Sbjct: 2 TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61
Query: 222 NIQKESTLH 248
NIQKESTLH
Sbjct: 62 NIQKESTLH 70
Score = 104 bits (250), Expect = 3e-23
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIF+KTLTGKTI LEVE+S+TI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 225 IQKESTLH 248
I K+STL+
Sbjct: 612 IHKKSTLY 619
Score = 101 bits (243), Expect = 2e-22
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
MQIFVK GK ITLEV +S+TI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 225 IQKESTLHRGF 257
I+ ESTLH F
Sbjct: 453 IRNESTLHLFF 463
Score = 100 bits (239), Expect = 7e-22
Identities = 51/70 (72%), Positives = 59/70 (84%), Gaps = 2/70 (2%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTLSD 218
MQIFVKTLT K I LEVE+ +TIENVKA +QDKEGI P+ QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 219 YNIQKESTLH 248
Y+IQKESTLH
Sbjct: 379 YSIQKESTLH 388
Score = 91.1 bits (216), Expect = 4e-19
Identities = 50/78 (64%), Positives = 57/78 (73%), Gaps = 7/78 (8%)
Frame = +3
Query: 45 MQIFVKTL-------TGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 203
MQIFVKT T KTITLEVE+S+TI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 204 RTLSDYNIQKESTLHRGF 257
RTL DYNIQK ST+H+ F
Sbjct: 529 RTLLDYNIQKGSTIHQLF 546
Score = 90.2 bits (214), Expect = 8e-19
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
Frame = +3
Query: 45 MQIFVKTL-----TGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 209
M IFVK L TG+ LEVE+S+TI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 210 LSDYNIQKESTLH 248
L+ YNIQK STL+
Sbjct: 298 LAHYNIQKGSTLY 310
Score = 89.8 bits (213), Expect = 1e-18
Identities = 47/74 (63%), Positives = 58/74 (78%), Gaps = 7/74 (9%)
Frame = +3
Query: 45 MQIFVKTLTGK-----TITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 203
MQIFV T +GK T+TL+VE+S+TIENVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 204 RTLSDYNIQKESTL 245
RTL+DY I+ STL
Sbjct: 215 RTLADYGIRNRSTL 228
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 111 bits (268), Expect = 2e-25
Identities = 53/75 (70%), Positives = 60/75 (80%)
Frame = +3
Query: 24 PGCRSNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 203
P R M IF+KTLTG+ I LEVE +TIEN+KAKIQDK+GIP DQQRLIF GKQLEDG
Sbjct: 79 PDFRHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDG 138
Query: 204 RTLSDYNIQKESTLH 248
TL+DYNIQ +S LH
Sbjct: 139 LTLADYNIQNDSILH 153
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 81.0 bits (191), Expect = 5e-16
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
M+I VKTLT K I +E+E ++TIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 225 IQKESTLH 248
+++ S LH
Sbjct: 61 LERGSVLH 68
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 66.9 bits (156), Expect = 8e-12
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = +3
Query: 12 TSGSPGCRSNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQ 191
T+ S +T+++ +KTL +T T +V +ET+ K KI + G+P QQRLIF G+
Sbjct: 13 TNASEKTPESTLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRV 72
Query: 192 LEDGRTLSDYNIQKESTLH 248
L+D LS+Y+++ TLH
Sbjct: 73 LKDDHPLSEYHLENGHTLH 91
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGK 188
M IF+KTLTG+T T EV+ S+TI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 64.9 bits (151), Expect = 3e-11
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
M+IFV T+ KT LEV+ S+TI+ +K+ I D+ G P DQQ L G +L++ T+SDYN
Sbjct: 141 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYN 200
Query: 225 IQKESTL 245
I+ ++ L
Sbjct: 201 IKPDANL 207
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVE-ASETIE 116
M I +KTL GK I LEVE +S TI+
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTID 25
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 56.8 bits (131), Expect = 9e-09
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 SGSPGCRSNTMQIFVKTLTG-KTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQ 191
S S S +QIFV+ ++G KTI + E +T+E + +I+ K IP +QR+I+ GKQ
Sbjct: 85 SSSNRPESTRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQ 144
Query: 192 LEDGRTLSDYNIQKESTL 245
L+ +L+ Y+I+++++L
Sbjct: 145 LQRENSLTYYSIEQDASL 162
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
M +++ T TG + ++ ++ ET+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 225 IQKESTL 245
I ES L
Sbjct: 61 ILFESRL 67
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 218
M+IFVKTL+G +EV+ ++ + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 219 YNIQKES 239
N+ + S
Sbjct: 61 NNVVENS 67
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
M + + T TG + ++ ++ ET+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 225 IQKESTLHR 251
I ES L R
Sbjct: 61 ILFESLLLR 69
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/67 (34%), Positives = 42/67 (62%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
M+I V T + ITL+V++ ET+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 225 IQKESTL 245
++ + L
Sbjct: 61 VKDDDLL 67
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 57 VKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 236
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 237 STLH--RGF 257
T+H RGF
Sbjct: 82 HTVHMVRGF 90
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +3
Query: 57 VKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 236
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 237 STLH 248
T+H
Sbjct: 82 HTIH 85
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 47.6 bits (108), Expect = 5e-06
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 21 SPGCRSNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQ-RLIFAGKQLE 197
+P + TM+I + L GK L V E++ ++KAK K + ++ + GK+LE
Sbjct: 492 APAIKLQTMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELE 551
Query: 198 DGRTLSDYNIQKESTLH 248
D ++L++ N+Q S +H
Sbjct: 552 DEKSLAEQNVQPNSLVH 568
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 SNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRT 209
S+ + VKT GK VE I VK +I K G + PD+Q +++ G++LED
Sbjct: 108 SDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSL 167
Query: 210 LSDYNIQKESTLH 248
++D +S LH
Sbjct: 168 INDICRNDDSVLH 180
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 SNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRT 209
S+ + VKT GK VE I VK +I K G + PD+Q +++ G++LED
Sbjct: 108 SDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSL 167
Query: 210 LSDYNIQKESTLH 248
++D +S LH
Sbjct: 168 INDICRNDDSVLH 180
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/72 (33%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 36 SNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTL 212
++ ++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + L
Sbjct: 8 TDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRL 67
Query: 213 SDYNIQKESTLH 248
SDY++++ TL+
Sbjct: 68 SDYHVEEGHTLY 79
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 215
M+IFVKTL G +EV+ +++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 216 DYNIQKES 239
+ + + S
Sbjct: 61 ENKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 215
M+IFVKTL G +EV+ +++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 216 DYNIQKES 239
+ + + S
Sbjct: 61 ENKVAENS 68
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 42 TMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 218
+M+I VK+L GK L V E++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 660 SMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAA 719
Query: 219 YNIQKESTLH 248
N+Q S +H
Sbjct: 720 QNVQPNSLVH 729
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 36 SNTMQIFVKTLTGKTITLEVEASETI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 212
S +Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +
Sbjct: 6 SKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAI 65
Query: 213 S 215
S
Sbjct: 66 S 66
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 215
M++ VKTL G + V S+TI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 216 DYNIQKESTL 245
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 215
M++ VKTL G + V S+TI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 216 DYNIQKESTL 245
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 215
M++ VKTL G + V S+TI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 216 DYNIQKESTL 245
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 215
M++ VKTL G + V ++TI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 216 DYNIQKESTL 245
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 215
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 216 DYNIQKESTLH 248
DY I+ H
Sbjct: 61 DYKIKACDIFH 71
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +3
Query: 27 GCRSNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPP 158
G + M IFV TL GKT LEV+ SE I+ VK I D+ +PP
Sbjct: 43 GPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVE-ASETIE 116
M+I +KT GKTI LE+E +SETI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3
Query: 36 SNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGR 206
S+ I V+T+ GK L VE S + VK +I KE GIP D + L G++L+D R
Sbjct: 106 SDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQR 164
Query: 207 TLSDYNIQKESTLH 248
++D ++ +H
Sbjct: 165 LITDLCQNGDNVIH 178
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLED 200
M +F +T +G T +E+ +T+ +K KI+ + IP +Q L+F G L+D
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQD 52
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = +3
Query: 24 PGCRSNTMQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 203
P +T+++ VK GK+I L V T++++K+++Q + P Q+LIF GK L +
Sbjct: 529 PTMADSTIKLTVK-FGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVET 587
Query: 204 RTLSDYNI 227
TL ++
Sbjct: 588 STLKQSDV 595
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/67 (26%), Positives = 37/67 (55%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
+++ ++ +G + T++V +T+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 225 IQKESTL 245
I+ S +
Sbjct: 62 IRHNSRI 68
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 224
+ + ++ +G + T++V +T+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 225 IQKESTL 245
I+ S +
Sbjct: 96 IRHNSRI 102
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLED 200
M +F +T +G +E+ +T+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.013
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 87 LEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLED 200
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 215
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS 66
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.3 bits (75), Expect = 0.052
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 57 VKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLED 200
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 33.5 bits (73), Expect = 0.091
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 48 QIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 209
++FV+T TG + LE++ S+ VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 87 LEVEASE-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 245
LEVE T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 31.1 bits (67), Expect = 0.49
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLSD 218
M I VK + T ++ + +ET+ +VK K+ P + QRL+ + LED ++L+D
Sbjct: 3 MYIRVKRMK-TTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLAD 61
Query: 219 YNIQKESTL 245
++ ++ +
Sbjct: 62 QKVENDAVV 70
>At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 31.1 bits (67), Expect = 0.49
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLSD 218
M I VK + T ++ + +ET+ +VK K+ P + QRL+ + LED ++L+D
Sbjct: 3 MYIRVKRMK-TTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLAD 61
Query: 219 YNIQKESTL 245
++ ++ +
Sbjct: 62 QKVENDAVV 70
>At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 31.1 bits (67), Expect = 0.49
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 45 MQIFVKTLTGKTITLEVEASETIENVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLSD 218
M I VK + T ++ + +ET+ +VK K+ P + QRL+ + LED ++L+D
Sbjct: 3 MYIRVKRMK-TTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLAD 61
Query: 219 YNIQKESTL 245
++ ++ +
Sbjct: 62 QKVENDAVV 70
>At3g27473.1 68416.m03434 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 662
Score = 30.7 bits (66), Expect = 0.64
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = -3
Query: 384 CLATVGSTRMKTGIAFTANHFLTVILHGENAKGRFNCTSSKSQNHGEVWILSGCYSLKEC 205
C AT+ T M + +H LT+ ENA G++ C + + + + W Y+ K+C
Sbjct: 524 CCATLPKTVM---LPRYDDHPLTLCYGDENASGKYWCDICERETNPKTWF----YTCKDC 576
Query: 204 G---HLLIV 187
G H+L V
Sbjct: 577 GVTFHILCV 585
>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
(CC-NBS class), putative domain signature CC-NBS exists,
suggestive of a disease resistance protein. Closest
homolog in Col-0 to RPP13.
Length = 835
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 179 KDETLLVWRNTFLVLDFSFDIFDSLGSFHLQ 87
+DE W LVLDF++D+ D L ++HL+
Sbjct: 54 EDEVSKEWSK--LVLDFAYDVEDVLDTYHLK 82
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +3
Query: 102 SETIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSD 218
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At4g38760.1 68417.m05489 hypothetical protein KIAA0169 gene, Homo
sapiens, D79991
Length = 561
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +1
Query: 154 LQTNNVSSLPGNN*KMAALFQTITSRKNPHFTVVLRLRGGTIEPSLRILAMKYNCEKMIC 333
LQ+N ++ G ++ +T S + + L+L GT+E L IL+ Y E+ +C
Sbjct: 282 LQSNLLNDFDGPISGHRSVVRTFISAFIASYEINLQLEDGTLELILDILSKVYQGEESLC 341
Query: 334 RKCYAR 351
+ + R
Sbjct: 342 CQFWDR 347
>At4g16070.1 68417.m02437 lipase class 3 family protein low
similarity to calmodulin-binding heat-shock protein
CaMBP [Nicotiana tabacum] GI:1087073; contains Pfam
profile PF01764: Lipase, PF03893: Lipase 3 N-terminal
region
Length = 654
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -3
Query: 432 ILDLLFGSQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKGRFNCTS 268
+L + Q SA C + M +A + HF+T I++G + F+ +S
Sbjct: 267 LLTYILREQKEFASATCFTFAPAACMTWDLAESGKHFITTIINGSDLVPTFSASS 321
>At2g19180.1 68415.m02238 expressed protein
Length = 179
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 463 YNKFPIWLLFNP*SSFWV 410
+N P WL F P SSFWV
Sbjct: 73 HNSTPDWLPFAPGSSFWV 90
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 313 NCEKMICRKCYARLHPRATNC 375
NC +C KCY H R+ +C
Sbjct: 161 NCTHSLCIKCYRDWHGRSESC 181
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = -3
Query: 423 LLFGSQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKGRFNCTSSKSQNH 250
+ F V V + L T + + H+L + L G+ + G F C ++ ++NH
Sbjct: 601 ITFPLSFVEVFIVVLITYFTIGYDLTVPSFLKHYLVLALCGQMSYGLFRCIAAVTRNH 658
>At3g28650.1 68416.m03576 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 665
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 330 NHFLTVILHGENAKGRFNCTSSKSQNHGEVWILSGCYSLKECGHLLIV 187
+H LT + +GE A G++ C + + + + W Y+ K CG L V
Sbjct: 541 DHPLT-LCYGEKASGKYWCDICERETNSKTWF----YTCKGCGVTLHV 583
>At3g27490.1 68416.m03437 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 682
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 330 NHFLTVILHGENAKGRFNCTSSKSQNHGEVWILSGCYS 217
+H LT + +GE A G++ C + + + E W +G S
Sbjct: 546 DHPLT-LCYGEKASGKYWCDICERETNPETWFYTGLES 582
>At2g33080.1 68415.m04056 leucine-rich repeat family protein
contains leucine rich-repeat domain Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 740
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 55 SSKPLRGRPLHWRWKLPRLSKMS 123
S+ + G+ W W+LPRL MS
Sbjct: 323 SNNRINGKIPEWLWRLPRLRSMS 345
>At2g33050.1 68415.m04053 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 800
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 55 SSKPLRGRPLHWRWKLPRLS 114
S+ ++G+ W WKLPRLS
Sbjct: 317 SNNLIKGKVPEWFWKLPRLS 336
>At1g58190.1 68414.m06605 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1784
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 333 ANHFLTVILHGENAKGRFNCTSSKSQNHGEVWILSG 226
A+ T+ILHG N +G F K ++ E+ LSG
Sbjct: 150 ASSLRTLILHGNNMEGTFPMKELKDLSNLELLDLSG 185
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,552,701
Number of Sequences: 28952
Number of extensions: 248180
Number of successful extensions: 914
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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