Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0391
         (588 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75546-7|CAA99895.1|  566|Caenorhabditis elegans Hypothetical pr...    31   0.61 
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical...    29   3.2  
AF078788-1|AAC26965.2|  629|Caenorhabditis elegans Hypothetical ...    28   4.3  
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr...    27   7.5  
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z75546-7|CAA99895.1|  566|Caenorhabditis elegans Hypothetical
           protein R05D11.8 protein.
          Length = 566

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 288 PLPPNRVSNETMKVVVFQRRSRETISHLCYTSHVSLQCPD*SQAQQGLLSPADSHQARSP 109
           PLP    SN   K    ++ +  T+S     S  +   PD S+ +   +SP  S + RSP
Sbjct: 75  PLPVQNSSNSVNKQRPLKKSAESTVSSTSTASSSASSVPDSSRNRSVAVSPQKSAKGRSP 134


>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
            protein Y47G6A.29 protein.
          Length = 2460

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -2

Query: 218  RSPTYATPLMSPYNAQTRVKLNRVFFPPLILTKPVPLGCG 99
            +S T  TP+ SP NA T   +NR   P L LT     G G
Sbjct: 1503 KSTTAITPIHSPANAPTPTAMNRT--PTLTLTPSAGAGGG 1540


>AF078788-1|AAC26965.2|  629|Caenorhabditis elegans Hypothetical
           protein ZC190.4 protein.
          Length = 629

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/45 (28%), Positives = 28/45 (62%)
 Frame = -1

Query: 333 LGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLCY 199
           +GT+ +   DIID   +P N +S++ +  +++  R  ET++H+ +
Sbjct: 287 VGTR-KTSTDIIDGFNVPSNMISDDNLPALIY--RVIETLNHMIF 328


>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
            F35G12.8 protein.
          Length = 1549

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +1

Query: 82   IYYLAKPQPRGTGLVR-ISGGKKTLLSLTLVWAL 180
            I ++ +P  +    ++ +SGG+KTL SL L++AL
Sbjct: 1261 ISFMVRPAKKAWKQIQFLSGGEKTLSSLALIFAL 1294


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 372 TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNET 256
           T+ +   TSP  T+GT   APA++      P N  S+ T
Sbjct: 623 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTT 661


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 372 TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNET 256
           T+ +   TSP  T+GT   APA++      P N  S+ T
Sbjct: 679 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTT 717


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,138,172
Number of Sequences: 27780
Number of extensions: 310672
Number of successful extensions: 882
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)