Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0390
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    25   0.50 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.1  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 442 IGAPWCVRNVDHHDDLNL-ELILS*GLAHQTQNCSDER 552
           +GA WC +    +D++N+ E++ S  L     NC  +R
Sbjct: 11  LGAVWCEQYTTKYDNINVDEILASERLLKNYFNCIMDR 48


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/48 (18%), Positives = 22/48 (45%)
 Frame = -2

Query: 200 PAFSYRLLRVPTPSILSFRPRKFQSIIISCYTTFHFNTYFMITIYHVN 57
           P F Y +  +      +F P K+  +   C T +  +  +++  ++V+
Sbjct: 282 PEFRYLMKGIDRADSFNFNPHKWLLVNFDCSTMWLKDPSWLVNAFNVD 329



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = +3

Query: 225 RGESLYEVQRPGCAGIMCYVIKSMTEDDQGRDRR 326
           RG+  +E+      G++C+ +K+  E ++   +R
Sbjct: 391 RGDERFEITEEVVLGLVCFRLKASNEINEALLKR 424


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 52  INKRLNILPRAEFLQ 8
           I +RL+ILP  EFLQ
Sbjct: 247 IFERLSILPVDEFLQ 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,138
Number of Sequences: 336
Number of extensions: 3197
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)