Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0389
         (523 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   5.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.7  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = -1

Query: 454 PQTTPGTNYHKQLPLWPQRVVSQIQLLSLLPNYRYFFHISQTTSLKYETVL-LR*YLSMF 278
           P TT     H + P   Q  V  +++       R   H+ Q    +Y  +  LR  L+  
Sbjct: 240 PITTCNKKQHLESPSALQAKVDPLKIPEA--EKRKLIHLLQ----EYRCIFSLRPGLTHK 293

Query: 277 ETH*MRLVTRSVHLLNPYPAPLLL 206
            TH ++L  ++  L  PYP P  L
Sbjct: 294 YTHEIKLHDKTPFLKRPYPVPFAL 317


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +2

Query: 407 PKGKLLMVIRSWSGLRIVLVILMEKSYRAHGRISRYF 517
           P G+    ++ W  LR+  +  ++   R H  ++ YF
Sbjct: 350 PLGRRFRALKLWFVLRLYGIENLQAFIRKHVELAHYF 386


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 61  EPS*KPKNVGVNQCRRLH 114
           E S KP+N+  N C  +H
Sbjct: 40  EGSFKPQNINANLCTHVH 57


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 133 YVNGEWV 153
           YVNGEWV
Sbjct: 90  YVNGEWV 96


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 466 DEHYPQTTPGTNYHKQLP 413
           +E  P+T P  N  +QLP
Sbjct: 347 EEAKPETLPFLNLQQQLP 364


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 367 LPNYRYFFHIS 335
           LP Y YFF++S
Sbjct: 82  LPFYSYFFYLS 92


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 374 ITSAKLSVFFSHK 336
           +T  KLSVFF +K
Sbjct: 172 LTKKKLSVFFGNK 184


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 367 LPNYRYFFHIS 335
           LP Y YFF++S
Sbjct: 38  LPFYSYFFYLS 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,129
Number of Sequences: 336
Number of extensions: 2787
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)