Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0388
         (604 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O96383 Cluster: Immune-related Hdd13; n=1; Hyphantria c...   213   2e-54
UniRef50_UPI000023D6AE Cluster: hypothetical protein FG04299.1; ...    37   0.32 
UniRef50_Q4S220 Cluster: Chromosome undetermined SCAF14764, whol...    33   6.9  
UniRef50_A4AIN3 Cluster: Glycerol operon regulatory protein; n=3...    33   6.9  
UniRef50_A2WEI8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  
UniRef50_A1WUK0 Cluster: Phosphoglycolate phosphatase; n=2; Ecto...    33   6.9  
UniRef50_Q4RGC9 Cluster: Chromosome 19 SCAF15103, whole genome s...    32   9.1  
UniRef50_Q2QMC6 Cluster: Putative uncharacterized protein; n=2; ...    32   9.1  

>UniRef50_O96383 Cluster: Immune-related Hdd13; n=1; Hyphantria
           cunea|Rep: Immune-related Hdd13 - Hyphantria cunea (Fall
           webworm)
          Length = 266

 Score =  213 bits (521), Expect = 2e-54
 Identities = 97/126 (76%), Positives = 108/126 (85%)
 Frame = +2

Query: 227 MSKRTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEELERRAESTHHYC 406
           MSKRT LNENYKG+VE +SIPAE+HER+GKKYAS GS +PIH C  EE++R A  THHYC
Sbjct: 26  MSKRTALNENYKGLVEELSIPAELHERDGKKYASFGSTIPIHSCSAEEIKRYANKTHHYC 85

Query: 407 GVFTDELLAPLEELAYVRLDENTAEKVFINRAKRILIVSSDGHLAQWRCAPTFESANRYI 586
            VFT+++LAPL EL YVRLDENTAEKVFINR KRIL+VSSDG LAQWRCAPTFES N YI
Sbjct: 86  DVFTEQVLAPLGELVYVRLDENTAEKVFINRNKRILLVSSDGELAQWRCAPTFESPNSYI 145

Query: 587 AGTPIV 604
           AG PIV
Sbjct: 146 AGAPIV 151


>UniRef50_UPI000023D6AE Cluster: hypothetical protein FG04299.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG04299.1 - Gibberella zeae PH-1
          Length = 899

 Score = 37.1 bits (82), Expect = 0.32
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +3

Query: 306 ETARSTRAWGPYCRYTAARPKSWSDALRARTTTAACSP 419
           +TARSTRA G      A RP S +D+ R+ +T   CSP
Sbjct: 737 DTARSTRARGKSVSNVAGRPTSMADSTRSSSTINLCSP 774


>UniRef50_Q4S220 Cluster: Chromosome undetermined SCAF14764, whole
            genome shotgun sequence; n=4; cellular organisms|Rep:
            Chromosome undetermined SCAF14764, whole genome shotgun
            sequence - Tetraodon nigroviridis (Green puffer)
          Length = 2515

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3

Query: 318  STRAWGPYCRYTAARPKSWSDALRARTTTAACSPTNCWRRSRNWPT 455
            STR+W       + RP SW    R  T+   C   +CWR S   P+
Sbjct: 1692 STRSWRWTASSPSTRPTSWGWRRRRATSCTTC--CSCWRSSTTGPS 1735


>UniRef50_A4AIN3 Cluster: Glycerol operon regulatory protein; n=3;
           Actinobacteria (class)|Rep: Glycerol operon regulatory
           protein - marine actinobacterium PHSC20C1
          Length = 257

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 227 MSKRTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEE 370
           +++R +  E  + ++   SI A I +RNG   A+V  ++P    PPE+
Sbjct: 177 IAERGIATEEDEAVLGESSIAAPIADRNGSVIAAVAVVMPSSEWPPED 224


>UniRef50_A2WEI8 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia dolosa AUO158|Rep: Putative uncharacterized
           protein - Burkholderia dolosa AUO158
          Length = 390

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -3

Query: 590 RRCTGSQTRRSARTATAPGARR 525
           RRC G +TR+ A  A APGARR
Sbjct: 51  RRCAGRRTRKRAGRARAPGARR 72


>UniRef50_A1WUK0 Cluster: Phosphoglycolate phosphatase; n=2;
           Ectothiorhodospiraceae|Rep: Phosphoglycolate phosphatase
           - Halorhodospira halophila (strain DSM 244 / SL1)
           (Ectothiorhodospirahalophila (strain DSM 244 / SL1))
          Length = 230

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +3

Query: 321 TRAWGPYCRYTAARPKSWSDALRARTTTAACSPTNCW 431
           TRA    C  T AR K   D +R    T  C P  CW
Sbjct: 129 TRAGAVVCGDTLARAKPHPDPIRHAAATLGCPPEACW 165


>UniRef50_Q4RGC9 Cluster: Chromosome 19 SCAF15103, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 19 SCAF15103, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 376

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
 Frame = +2

Query: 146 KIISYCVASREVVAAC*FSDLF----SKKTAMSKRT---VLNENYKGIVESMSIPAEIHE 304
           ++ + CV   EV  AC    +F     K T   K+    VL+ +YKG+    +    I  
Sbjct: 214 RVYTGCVCQDEVTVACLCPSVFYVRSKKSTEQMKKVPTIVLSVSYKGVKFIDATNKNIIA 273

Query: 305 RNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVFT 418
            +  +  S  +  P        + +  +S+HHYC VFT
Sbjct: 274 EHEIRNISCAAQDPEDLSTFAYITKDLKSSHHYCHVFT 311


>UniRef50_Q2QMC6 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 351

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +3

Query: 303 RETARSTRAWGPYCRYTAARPKSWSDALRARTTTAACSPTNCWRRSRNWPTLDSTRILLR 482
           R  A   R  GP     A   +SW+ +       A  SP  C+RR + W +L S+    R
Sbjct: 237 RPHANVRRTNGPRSSPAAMAMESWARSASDAAADAGASP-GCFRRIKIWSSLSSSSSCSR 295

Query: 483 RSS 491
           RS+
Sbjct: 296 RSA 298


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,964,109
Number of Sequences: 1657284
Number of extensions: 9272763
Number of successful extensions: 30387
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30362
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)