Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0388
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.5  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   4.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.1  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   8.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.0  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 103 KLRSRFTTTLFKNLIFVSIFYISIY 29
           K R +    LFKN  F  +  IS+Y
Sbjct: 120 KTRDQKERNLFKNAYFQLVLSISVY 144


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 604 DDGRAGDVPVRRLEGRRAPP 545
           DDG++ DVPV  L+     P
Sbjct: 213 DDGKSEDVPVISLKNENELP 232


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 61  IFVSIFYISIYCILDHVV 8
           I VSIFY+S Y I + ++
Sbjct: 248 IVVSIFYMSAYLISNPIM 265


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 383 AESTHHYCGVFTDELLAPLEELAY 454
           A+ST H  G  T ++  P   L+Y
Sbjct: 58  ADSTSHTDGASTPDVRPPSSSLSY 81


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 383 AESTHHYCGVFTDELLAPLEELAY 454
           A+ST H  G  T ++  P   L+Y
Sbjct: 214 ADSTSHTDGASTPDVRPPSSSLSY 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,089
Number of Sequences: 336
Number of extensions: 2238
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)