Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0387
(596 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_373| Best HMM Match : Somatomedin_B (HMM E-Value=3.5) 33 0.23
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39) 31 0.53
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_2152| Best HMM Match : EGF (HMM E-Value=0) 31 0.53
SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 30 1.2
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_32734| Best HMM Match : Keratin_B2 (HMM E-Value=0.14) 30 1.2
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 30 1.6
SB_11813| Best HMM Match : DUF1570 (HMM E-Value=9.3) 30 1.6
SB_1668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24) 30 1.6
SB_24531| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00083) 30 1.6
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 29 2.2
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31) 29 2.2
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 29 2.2
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 29 2.2
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 29 2.9
SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_39796| Best HMM Match : VWA (HMM E-Value=0) 29 3.8
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_15247| Best HMM Match : Hormone_5 (HMM E-Value=0.98) 28 5.0
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45) 28 5.0
SB_58969| Best HMM Match : Avidin (HMM E-Value=3.7) 28 6.6
SB_49765| Best HMM Match : EGF (HMM E-Value=0) 28 6.6
SB_43808| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32) 28 6.6
SB_43806| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31) 28 6.6
SB_41393| Best HMM Match : WSC (HMM E-Value=0.06) 28 6.6
SB_33236| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32) 28 6.6
SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062) 28 6.6
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_31406| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31) 28 6.6
SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0) 28 6.6
SB_19025| Best HMM Match : Keratin_B2 (HMM E-Value=1.3) 27 8.7
SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23) 27 8.7
SB_26790| Best HMM Match : DUF262 (HMM E-Value=4.8) 27 8.7
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) 27 8.7
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 9/69 (13%)
Frame = +1
Query: 409 YGCACKIGYLRDENGT-CIPQDKCPTVPCPVNE--------YFTNCAKGMCRQENCTELG 561
Y C C GY+ + T C+ D+C T+P N+ Y +C G + T
Sbjct: 451 YSCECSAGYVLSSDFTSCLDVDECLTIPAICNQTCSNIPGSYVCSCVTGYYLGVDNTTCL 510
Query: 562 KLSECKTQS 588
L EC T +
Sbjct: 511 DLDECSTNA 519
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +1
Query: 352 CIEKNDIIFCQLVDEEKCE-----YGCACKIGY-LRDENGTCIPQDKCPT 483
C++ ++ + + + C Y C+C GY L +N TC+ D+C T
Sbjct: 468 CLDVDECLTIPAICNQTCSNIPGSYVCSCVTGYYLGVDNTTCLDLDECST 517
>SB_373| Best HMM Match : Somatomedin_B (HMM E-Value=3.5)
Length = 404
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 388 VDEEKCEYGCACKI--GYLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMCR 537
V + CE C K G + TC P DKC VP ++ C +C+
Sbjct: 278 VSKATCEGKCCGKAATGAALEHTRTCTPNDKCTYVPVKIDMMVDKCDTTVCK 329
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 31.9 bits (69), Expect = 0.40
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 394 EEKCEYGCACKIGYLRDENGTCIPQDKC 477
E C GC C G + +NGTC+ +C
Sbjct: 1245 ERPCVSGCYCPDGLIMHDNGTCVQSMQC 1272
>SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39)
Length = 201
Score = 31.5 bits (68), Expect = 0.53
Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Frame = +1
Query: 289 SATCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQ 468
+ CP+ G P + + N+ CQ +Y C C G+ NG Q
Sbjct: 54 TCACPQGYTGWNCNGTLHPCETLNCNNGGTCQKQSNASDDYVCVCVTGF----NGIRCEQ 109
Query: 469 --DKCPTVPCP-------VNEYFTNCAKGMCRQENCTELGKLSECKTQ 585
D C ++PC VN + NC C ++ECK Q
Sbjct: 110 NIDDCASLPCKHGKCVDGVNNHTCNCPGSGYEGPKCDV--DINECKVQ 155
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +1
Query: 331 GLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYF 510
G C + C + + D E E C CK G+ D C QD+C PCP N
Sbjct: 1324 GTCEGKVCDFNGECVAKNNSDGET-ERTCRCKEGFEGD-GIICTDQDECLKGPCPQNAKC 1381
Query: 511 TN 516
N
Sbjct: 1382 VN 1383
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKCPT--VPCPVNEYFTN 516
+ C C GY RD G C ++C T C VN TN
Sbjct: 482 FTCQCAEGYERDSQGKCADVNECKTGKHDCSVNALCTN 519
>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
Length = 1603
Score = 31.5 bits (68), Expect = 0.53
Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Frame = +1
Query: 289 SATCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQ 468
+ CP+ G P + + N+ CQ +Y C C G+ NG Q
Sbjct: 78 TCACPQGYTGWNCNGTLHPCETLNCNNGGTCQKQSNASDDYVCVCVTGF----NGIRCEQ 133
Query: 469 --DKCPTVPCP-------VNEYFTNCAKGMCRQENCTELGKLSECKTQ 585
D C ++PC VN + NC C ++ECK Q
Sbjct: 134 NIDDCASLPCKHGKCVDGVNNHTCNCPGSGYEGPKCDV--DINECKVQ 179
>SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1678
Score = 31.1 bits (67), Expect = 0.71
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKCPTVP 489
Y C+CK GY +++ C+ ++C P
Sbjct: 809 YKCSCKRGYAHNDSNVCVDVNECTETP 835
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = +1
Query: 295 TCPENEERTCLQGLCRPQ--KCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQ 468
+C +E R C P +C D + L DE C C R NG C P+
Sbjct: 866 SCRASEFRCQASRKCIPLSWRCDGDYDCLAPDLSDEANCSVATNCSASMFRCANGQCKPR 925
Query: 469 D 471
D
Sbjct: 926 D 926
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 322 CLQGLCRPQ-KCIEKNDIIFCQLV--DEEKCEYGCACKIGYLRDENGTC-IPQDKCPTVP 489
CL C C+EK ++ Q V D ++ CAC +GY C I D C ++P
Sbjct: 859 CLSDPCLNNGTCVEKIGVVGYQCVCPDGFAGDFSCACPVGY---TGKLCEIDIDDCASMP 915
Query: 490 C 492
C
Sbjct: 916 C 916
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKCPTVPC 492
Y CAC +GY D+N + D+C + PC
Sbjct: 2696 YSCACAVGY-TDQN-CSVEIDECASNPC 2721
>SB_32734| Best HMM Match : Keratin_B2 (HMM E-Value=0.14)
Length = 308
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/99 (29%), Positives = 38/99 (38%)
Frame = +1
Query: 292 ATCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQD 471
A C ++ CL C Q I + I C + +E CA + R G + QD
Sbjct: 133 AGCDVRQDE-CLGMSCATQSLIAR--IAGCDVRQDECLGMSCATQSLIARIA-GCDVRQD 188
Query: 472 KCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQS 588
+C PC A RQ+ C LG C TQS
Sbjct: 189 ECLGTPCATQPLIARIAGCDARQDEC--LG--MSCATQS 223
Score = 27.9 bits (59), Expect = 6.6
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +1
Query: 337 CRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTC-IPQDKCPTVPCPVNEYFT 513
C Q I + I C V +++C G +C L C + QD+C PC
Sbjct: 3 CATQSLIAR--IAGCD-VRQDEC-LGMSCATQSLITRIADCDVRQDECLGTPCATQPLIA 58
Query: 514 NCAKGMCRQENCTELGKLSECKTQS 588
A RQ+ C LG C TQS
Sbjct: 59 RIAGCDARQDEC--LG--MSCATQS 79
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = +1
Query: 295 TCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDE---EKCEYGCACKIGYLRDENGTCIP 465
TC +N + +KCI+ C+ ++ + C+ G + NGTCI
Sbjct: 469 TCDQNTNECAARPCINGRKCIDLIGDYACECLEGWQGKNCDQNINDCAGQCK-HNGTCID 527
Query: 466 QDKCPTVPCPVNEYFTNC 519
Q T CP+ NC
Sbjct: 528 QLNDYTCHCPLGYTGKNC 545
>SB_11813| Best HMM Match : DUF1570 (HMM E-Value=9.3)
Length = 205
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 252 VIRSKFPNEFKNFSYLSRKRRTHLPSRFMQTSEVHRKK 365
++RS+ PN N + ++ R HLP R S++ R+K
Sbjct: 1 MVRSELPNAGSNVARTNKVRADHLPLRMTVKSKLGRRK 38
>SB_1668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 472 CLAVYKFHFRLSDILFCRHIHIRTSPHQLIG 380
C + YKFH RL + RHI TS H G
Sbjct: 56 CRSTYKFHKRLHSYMTSRHICAVTSRHICFG 86
>SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24)
Length = 453
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +1
Query: 319 TCLQGLCRPQKCIEKND-IIFCQLVDEEKCEYGC-ACKIG-YLRDENGTCIPQDKCPTVP 489
+C+QG Q+C K D +FC + +E C C CK G + + C + P VP
Sbjct: 16 SCMQGRVH-QQCKSKCDRTLFCGHICQEPCTKNCPPCKEGCQNKCTHSECKKKCGEPCVP 74
Query: 490 CPVNEYFTNCAKGMCRQENCTEL 558
C CA CR C++L
Sbjct: 75 CA-----EPCA-WKCRHYKCSKL 91
>SB_24531| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00083)
Length = 478
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 252 VIRSKFPNEFKNFSYLSRKRRTHLPSRFMQTSEVHRKK 365
++RS+ PN N + ++ R HLP R S++ R+K
Sbjct: 1 MVRSELPNAGSNVARTNKVRADHLPLRMTVKSKLGRRK 38
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKCPTVPCP--------VNEYFTNCAKGMCRQENCTELGK 564
+ CACK G+ + GT I D+C + PC +N + C G ++ TE+ +
Sbjct: 1130 FACACKPGFTGKDCGTEI--DECASNPCKNGATCTDRINGFTCTCKPGFTDKDCGTEIDE 1187
Query: 565 LSE--CKTQST 591
+ CK +T
Sbjct: 1188 CASKPCKNGAT 1198
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKCPTVPCP--------VNEYFTNCAKGMCRQENCTELGK 564
+ CACK G+ + GT I D+C + PC +N + C G ++ TE+ +
Sbjct: 1206 FACACKPGFTGKDCGTEI--DECASNPCKNGATCTDRINGFTCTCKPGFTGKDCGTEIDE 1263
Query: 565 LSE--CKTQST 591
+ CK +T
Sbjct: 1264 CASKPCKNGAT 1274
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKCPTVPC 492
Y CACK GY D C D+C PC
Sbjct: 359 YTCACKPGYYGD---NCADIDECTNKPC 383
>SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31)
Length = 491
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 8/61 (13%)
Frame = +1
Query: 406 EYGCACKIGYLRDENGTCIPQDKCPTVPCP--------VNEYFTNCAKGMCRQENCTELG 561
EY C C +GY D C Q KC PC N+Y C G +NC E
Sbjct: 370 EYRCVCALGYKGDR---CDIQSKCFPNPCKNFATCTEHPNDYECTCHPGF-HGKNCDEES 425
Query: 562 K 564
K
Sbjct: 426 K 426
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Frame = +1
Query: 382 QLVDEEKCEYGCACKIGYLRDENGTCIP---QDKCPTVPCPVNEYFTNCAKGMCRQENCT 552
Q+ + C + C+ +GY + C+ Q CP + C + C G C C
Sbjct: 39 QVCIDGNCTFNCSRNMGYGSCDQ-LCLQNKDQKPCPRLKCAASTCNQRCLSGGCTDVACN 97
Query: 553 ELGKLSECKTQST 591
L C + T
Sbjct: 98 SHTCLQTCTSNCT 110
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKCPT--VPCPVNEYFTN 516
+ C C GY R+ G C ++C T C VN TN
Sbjct: 25 FTCQCAEGYERNSQGKCADVNECKTGKHDCSVNALCTN 62
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 400 KCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCT 552
K + C C +GY D N TC+ ++C T + Y + A NCT
Sbjct: 1255 KGSFYCTCNVGYSGDGN-TCVDINECKTT--ALAPYHGHYAHNCHSDANCT 1302
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKC 477
Y CAC +GY D TC+ D+C
Sbjct: 661 YTCACNVGYTGD-GETCVDIDEC 682
>SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 628
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +1
Query: 295 TCPENEERTCLQGLCRPQ--KCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCI 462
+CP N R C G C P +C ND + DE G +C G NG CI
Sbjct: 9 SCPSNRFR-CNNGRCIPMSWRCDGDNDC--GDMSDEPPSCSGRSCNSGQFSCSNGRCI 63
>SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +1
Query: 307 NEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDEN-GTCI 462
N E CL R + E+ND D Y C CK GY+ D + G C+
Sbjct: 433 NNENACLD---RNECLEEENDCDDNAYCDNTSGSYECYCKEGYVGDGSIGNCV 482
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 409 YGCACKIGYLRDE-NGTCIPQDKCPT-VPCPVNEYFTNC 519
+ C C+ GYL D+ CI D+C CP TNC
Sbjct: 307 FTCECESGYLMDDLKAHCIDVDECALGATCPSG---TNC 342
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKC--PTVPCPVNEYFTN 516
Y C CK G++ +EN C+ +++C C N Y N
Sbjct: 423 YMCLCKPGFINNEN-ACLDRNECLEEENDCDDNAYCDN 459
>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
Length = 2119
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +1
Query: 319 TCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKI--GYLRDENGTCIPQDKCPTVPC 492
TC +GL EK ++ L + +YGC+ + G + I +D P
Sbjct: 684 TCPEGLRARISKAEKAALVIANLTTADSGQYGCSLMLATGAPLVDRMQLIVEDPPPPPEP 743
Query: 493 PVNEYFT 513
P++ YFT
Sbjct: 744 PIDAYFT 750
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 448 NGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKT 582
NGT P+ VPCP Y N +G R+ +C C+T
Sbjct: 2023 NGTYCPEGTPIPVPCPKGSY--NPYRGKAREADCVPCEGGKYCET 2065
>SB_15247| Best HMM Match : Hormone_5 (HMM E-Value=0.98)
Length = 997
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 467 CGIQVPFSSLRYPILQAHPYSHFS 396
CG++ +++RYP +Q HP H +
Sbjct: 125 CGVKKRKTTMRYPSVQNHPLKHLA 148
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 385 LVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPC-PVNEYFTNCAKGM 531
+ ++EKC+ CK GY++D G C K T C F CA+G+
Sbjct: 992 MCEKEKCK-PMQCKSGYVKDVCGCCDVCAKTVTQKCGGYWGQFGTCAEGL 1040
>SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45)
Length = 622
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = +1
Query: 385 LVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMC 534
L DE CE G K G L D + C+ CP N + C G C
Sbjct: 184 LEDEFGCENGQCVKRGLLCDGDKACLDGSDEKHCSCPSNMFL--CPSGEC 231
>SB_58969| Best HMM Match : Avidin (HMM E-Value=3.7)
Length = 706
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 405 RIWMCLQNRISERRKWN-LYTARQVSNC 485
R W+ I E RKWN + T QV NC
Sbjct: 673 REWLTDSAHIHESRKWNTMITYHQVDNC 700
>SB_49765| Best HMM Match : EGF (HMM E-Value=0)
Length = 508
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCT 552
Y C C GY T IP C + PC N G + CT
Sbjct: 140 YTCTCSPGYTGRHCDTVIPLKPCDSSPCSNGGVCNNTQDG--KNYTCT 185
>SB_43808| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32)
Length = 174
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 490 CPVNEYFTNCAKGMCRQENCTELGKLSECK 579
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_43806| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31)
Length = 174
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 490 CPVNEYFTNCAKGMCRQENCTELGKLSECK 579
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_41393| Best HMM Match : WSC (HMM E-Value=0.06)
Length = 361
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +1
Query: 340 RPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEY 507
R +KC N C +D+ C G Y +E + QD+CP VN Y
Sbjct: 137 RSKKCYT-NGYKRCDSMDDAPCVGGSFRDFVYQLEEEDALMDQDRCPARNHKVNCY 191
>SB_33236| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32)
Length = 174
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 490 CPVNEYFTNCAKGMCRQENCTELGKLSECK 579
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062)
Length = 238
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 334 LCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTV 486
+C+ Q K DI C D + + C C G L NG CI ++CP +
Sbjct: 11 MCKLQATCNKRDI--C---DTSRAKLRCCCDDG-LVFYNGLCIRVEECPCI 55
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQ-DKCPTVPCPVNEYFTNCAK 525
YGC+CK GY R +N C D+C PC +N + C +
Sbjct: 378 YGCSCKAGY-RGKN--CQENIDECDPNPC-LNGATSRCTR 413
>SB_31406| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31)
Length = 174
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 490 CPVNEYFTNCAKGMCRQENCTELGKLSECK 579
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1054
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 409 YGCACKIGYLRDENGTCIPQDKCPTVP 489
Y C CK GY + N TC ++C +P
Sbjct: 125 YTCRCKRGYTLN-NNTCTDVNECTEIP 150
>SB_19025| Best HMM Match : Keratin_B2 (HMM E-Value=1.3)
Length = 227
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = +1
Query: 322 CLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVN 501
C + C C +N I C C+ C +G+ C+ +C T+ C
Sbjct: 59 CGRHPCNTLTCSTENCIQSCH-----GCKMECDRSVGFCSQR---CL-SGQC-TIACAAK 108
Query: 502 EYFTNCAKGMCRQENCTE 555
+C KG CR+E E
Sbjct: 109 RCSLDCRKGECRREKTEE 126
>SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23)
Length = 1250
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +1
Query: 415 CAC-KIGYLRDENGTCIPQDKCPTVPCPV--NEYFTNCAKGMCRQ--ENCT 552
C+C + GYL D++ CP+ PC + N +++ +C+Q +CT
Sbjct: 80 CSCNQTGYLLDQDQKTCKWTGCPSNPCRICPNNTYSDQFMPVCQQCSSSCT 130
>SB_26790| Best HMM Match : DUF262 (HMM E-Value=4.8)
Length = 525
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/23 (43%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +3
Query: 291 SYLSRKRRTHLPS-RFMQTSEVH 356
SY+S++++TH+P+ R T +VH
Sbjct: 165 SYISQRKKTHIPALRVWSTDDVH 187
>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
Length = 1215
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Frame = +1
Query: 421 CKIGYLRDENG-----TCIPQDKCPT---VPCPVNEYFTNCAKGMCRQENCT 552
C G+ D+ G TC + CPT +P P + N A G+ R +CT
Sbjct: 642 CSSGFYCDDRGLSVPKTCTTGNFCPTGTTIPQPCPSGYYNNATGVKRSVDCT 693
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +1
Query: 259 EVNFPMNLKISATCPE---NEERTC-LQGLCRPQKCIEKNDIIFCQ----LVDEEKCEYG 414
E N P KIS TCPE E+ C P +C + + + + +E+C+
Sbjct: 597 EANVPSG-KISCTCPECSKREDPVCGSDSKTYPNECRMRQEACWNNKWIIVAQQEECD-P 654
Query: 415 CACKIGYLRDENGTCIPQDKCPTVPCP 495
C K + +C +D PT CP
Sbjct: 655 CN-KYNCITPPYSSCTTKDNKPTCICP 680
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,774,890
Number of Sequences: 59808
Number of extensions: 429316
Number of successful extensions: 1270
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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