Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0381
         (595 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4SHD4 Cluster: Chromosome 5 SCAF14581, whole genome sh...    34   2.2  
UniRef50_UPI00015B95C8 Cluster: UPI00015B95C8 related cluster; n...    33   3.8  
UniRef50_Q8ZUV7 Cluster: Cobyrinic acid a,c-diamide synthase (Cb...    32   8.8  

>UniRef50_Q4SHD4 Cluster: Chromosome 5 SCAF14581, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 5 SCAF14581, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 488

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -1

Query: 376 CGVARMNILFTFATCRRRIENCQPIKIPRSSPIFVKCKTTH 254
           C    + + +T   CR  +  C P  IP    +F  CKT H
Sbjct: 25  CPSKGLKVGYTVPCCRNALNQCDPCLIPPGCSLFENCKTCH 65


>UniRef50_UPI00015B95C8 Cluster: UPI00015B95C8 related cluster; n=1;
           unknown|Rep: UPI00015B95C8 UniRef100 entry - unknown
          Length = 833

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 367 PPHIIIVGCSWQSSRGHVDSLFIKALTAALHSSHVLLEIHEYPRP 501
           PP +   G +W++  G  ++LF +  T    S   LLE+ E P P
Sbjct: 440 PPDLPSAGSTWEALSGRCEALFAEGATMPTKSLRHLLELMEIPLP 484


>UniRef50_Q8ZUV7 Cluster: Cobyrinic acid a,c-diamide synthase (CbiA)
           part 2, authentic frameshift; n=3; Pyrobaculum|Rep:
           Cobyrinic acid a,c-diamide synthase (CbiA) part 2,
           authentic frameshift - Pyrobaculum aerophilum
          Length = 375

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = -2

Query: 495 RILVDFQEDVGTMKSSCQGFNKQGIYMTTTALPRATDYDDVGWLE*IYYLRLRPVGEG 322
           R L+ + E  G + + C G     +YMT++ +   ++Y+ VG L+ +  +  RPVG+G
Sbjct: 250 RALLKYIEGGGRLYAECGGL----MYMTSSIIIDRSEYEMVGALDAVTVMLERPVGKG 303


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,391,186
Number of Sequences: 1657284
Number of extensions: 10772434
Number of successful extensions: 20736
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20733
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)