Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0381
         (595 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0194 + 2130274-2131725                                           28   6.5  
05_06_0167 - 26104527-26104567,26105130-26105226,26105377-261054...    28   6.5  
04_03_0770 + 19420249-19420359,19421691-19421763,19421887-194219...    28   6.5  
11_06_0701 + 26407055-26407597,26407794-26409644                       27   8.5  

>10_01_0194 + 2130274-2131725
          Length = 483

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 390 TDYDDVGWLE*IYYLRLRPVGEGSRIVNLSRFQ 292
           +D ++  W E  +Y  L  + EGS+++ +SRF+
Sbjct: 254 SDLNEKNWEE--FYTSLAQMNEGSKVITISRFR 284


>05_06_0167 -
           26104527-26104567,26105130-26105226,26105377-26105415,
           26105628-26105678,26105978-26106059,26106222-26106282,
           26106380-26106509,26106630-26106758,26107057-26107314
          Length = 295

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 246 CLFCNNVCPTLQSVKHDYPS 187
           C +C NVCP +  ++ DY S
Sbjct: 174 CKYCANVCPNVFRIEEDYGS 193


>04_03_0770 +
           19420249-19420359,19421691-19421763,19421887-19421964,
           19422223-19422284,19422404-19422472,19422672-19422700,
           19422784-19422991,19423071-19423301,19424079-19424132,
           19425344-19426292,19426853-19426863
          Length = 624

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 388 GCSWQSSRGHVDSLFIKALTAALHSSHVLLEIHEYPRPCKSKAIPRP 528
           G  WQSS   V   F   +T+   +S  + E+HE PRP  +    RP
Sbjct: 477 GPGWQSS---VAPKFTPRITSLPTTSPRISELHELPRPPANVGAARP 520


>11_06_0701 + 26407055-26407597,26407794-26409644
          Length = 797

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 339 ANVNSIFILATPHHHSRLLLAEQSWSCRF 425
           +NV +IF + TP H+ R L+    + CRF
Sbjct: 602 SNVENIFEMLTPPHNLRDLVIGYFFGCRF 630


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,255,087
Number of Sequences: 37544
Number of extensions: 294569
Number of successful extensions: 522
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)