Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0380
(611 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0505 - 23534273-23535171,23536545-23536646,23536776-23536842 219 1e-57
04_04_0299 - 24243364-24244259,24244417-24244428,24245092-242451... 212 2e-55
03_05_0387 + 23708447-23708470,23708616-23708739,23709081-237092... 64 8e-11
01_06_0521 + 30001662-30001752,30001883-30001999,30002099-300022... 50 1e-06
09_05_0014 - 20071514-20071690,20071779-20071894,20072177-200723... 36 0.025
03_02_0315 - 7401708-7401860,7401962-7402123,7402211-7402279,740... 34 0.077
06_01_0042 + 410061-410544,411401-411837 33 0.13
12_01_0255 + 1888193-1888914,1890247-1890460,1890535-1890615,189... 31 0.95
11_01_0257 + 1972111-1972832,1974214-1974427,1974502-1974582,197... 31 0.95
07_01_1147 + 10771305-10771619,10771991-10772077 31 0.95
09_04_0258 - 16175258-16176069,16176111-16176414 30 1.3
06_01_0963 + 7411944-7412396,7412677-7412736,7412828-7413010,741... 30 1.3
10_08_0965 + 21915842-21916906 30 1.7
08_02_1615 + 28257275-28258428,28258523-28259144 30 1.7
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452... 29 2.2
08_01_0102 - 735359-735370,735371-735455,735531-735616,735697-73... 29 2.2
03_02_0930 - 12480983-12481888 29 2.2
12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069... 29 2.9
07_01_0939 + 7939716-7940220,7940675-7941564 29 3.8
03_06_0680 - 35497868-35497884,35498058-35501961 29 3.8
11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229 28 5.1
10_08_0041 - 14374684-14377339,14377371-14378233 28 5.1
08_02_0075 - 11953723-11956203,11958213-11958512 28 5.1
08_01_0931 + 9177466-9177493,9178205-9178317,9178418-9178759,917... 28 5.1
07_03_0028 + 12611734-12612522 28 5.1
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 28 5.1
02_04_0109 + 19812544-19814474,19814574-19814607 28 5.1
12_01_0646 + 5474234-5476189 28 6.7
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 28 6.7
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 28 6.7
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 28 6.7
06_03_0783 - 24546403-24546765,24547202-24547262,24547899-245480... 28 6.7
05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351 28 6.7
04_04_1166 - 31427523-31428154,31428888-31429020 28 6.7
03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435 28 6.7
11_01_0791 + 6627961-6630702 27 8.9
07_01_1011 + 8571297-8571517,8571943-8572148,8572219-8572334 27 8.9
07_01_0730 + 5562805-5563254 27 8.9
03_06_0404 + 33692534-33693607 27 8.9
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 27 8.9
03_01_0515 - 3864796-3865425 27 8.9
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 27 8.9
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077... 27 8.9
02_01_0135 + 967172-967229,968316-968657,968936-969015,969063-96... 27 8.9
01_03_0284 - 14595643-14595663,14595978-14596018,14596379-145967... 27 8.9
>02_04_0505 - 23534273-23535171,23536545-23536646,23536776-23536842
Length = 355
Score = 219 bits (535), Expect = 1e-57
Identities = 100/159 (62%), Positives = 123/159 (77%)
Frame = +2
Query: 134 SSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQRLSNVKHKI 313
S VP +A +HCPGTQSE+AGKA ACAGCPNQ ICA+ PDP + I +R++ VKHKI
Sbjct: 14 SDVPADANEHCPGTQSEEAGKADACAGCPNQQICATAPKG-PDPDLVGIVERMATVKHKI 72
Query: 314 LILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGEQVHNSGSG 493
L+LSGKGGVGKST ++ + LA M D VG+LD DICGPS P++LG+ G+ +H S G
Sbjct: 73 LVLSGKGGVGKSTFSAQLSFALAEM--DCQVGLLDIDICGPSIPKMLGLEGQDIHQSNLG 130
Query: 494 WSPVYVTDNLSLMSIGFLLGSPDDAVIWRGPKKNGMIKQ 610
WSPVYV NL +MSIGF+L +PDDAVIWRGP+KNG+IKQ
Sbjct: 131 WSPVYVESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQ 169
>04_04_0299 -
24243364-24244259,24244417-24244428,24245092-24245193,
24245298-24245340
Length = 350
Score = 212 bits (518), Expect = 2e-55
Identities = 100/161 (62%), Positives = 121/161 (75%), Gaps = 4/161 (2%)
Frame = +2
Query: 140 VPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPA----VELIKQRLSNVKH 307
VP+NA HCPGTQSE AGKA ACAGCPNQ ICA+ PDP + I +R++ VKH
Sbjct: 8 VPENANDHCPGTQSEAAGKADACAGCPNQQICATAPKG-PDPGAITHLLAIIERMNTVKH 66
Query: 308 KILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGEQVHNSG 487
KIL+LSGKGGVGKST ++ + LA M D VG+LD DICGPS P++LG+ G+ +H S
Sbjct: 67 KILVLSGKGGVGKSTFSAQLSFALAEM--DHQVGLLDIDICGPSIPKMLGLEGQDIHQSN 124
Query: 488 SGWSPVYVTDNLSLMSIGFLLGSPDDAVIWRGPKKNGMIKQ 610
GWSPVYV NL +MSIGF+L +PDDAVIWRGP+KNG+IKQ
Sbjct: 125 LGWSPVYVESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQ 165
>03_05_0387 +
23708447-23708470,23708616-23708739,23709081-23709203,
23710723-23710820,23711778-23711918,23712236-23712361,
23713316-23713486
Length = 268
Score = 64.1 bits (149), Expect = 8e-11
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = +2
Query: 290 LSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGE 469
++ V I + SGKGGVGKST I LA + VG+LDADI GPS P ++ + +
Sbjct: 27 IAGVSDIIAVASGKGGVGKSTTAVNIAVALAKKF-QLKVGLLDADIYGPSIPTMMNLHAK 85
Query: 470 QVHNSGSGWSPVYVTDN--LSLMSIGFLLGSPDDAVIWRGP 586
+ PV DN + MSIGFL+ D ++WRGP
Sbjct: 86 PEVSEDMRMIPV---DNYGVQCMSIGFLV-DKDAPIVWRGP 122
>01_06_0521 +
30001662-30001752,30001883-30001999,30002099-30002229,
30002320-30002370,30002639-30002689,30002864-30003007,
30003082-30003224,30003376-30003448,30003540-30003635,
30003737-30003835,30003905-30003958,30004032-30004155,
30004420-30004544,30004720-30004842,30004948-30005028
Length = 500
Score = 50.0 bits (114), Expect = 1e-06
Identities = 33/94 (35%), Positives = 48/94 (51%)
Frame = +2
Query: 329 KGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGEQVHNSGSGWSPVY 508
KGGVGKSTV + + LA M VGI DAD+ GPS P ++ + + S +
Sbjct: 147 KGGVGKSTVAVNLAYTLAGMG--ARVGIFDADVFGPSLPTMVSPENRLLVMNPESRS-IL 203
Query: 509 VTDNLSLMSIGFLLGSPDDAVIWRGPKKNGMIKQ 610
T+ L + + F A++ RGP +G+I Q
Sbjct: 204 PTEYLGVKMVSFGFAGQGRAIM-RGPMVSGVINQ 236
>09_05_0014 -
20071514-20071690,20071779-20071894,20072177-20072315,
20072649-20072672,20072879-20072989,20073089-20073239,
20073357-20073478,20074287-20074556
Length = 369
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 242 GEASQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINV 406
G+ + PDP V + L K + + GKGGVGK+T +S++ LAS + V
Sbjct: 6 GDGAMPDPTV---RNLLEQESLKWVFVGGKGGVGKTTCSSILSILLASARQSVLV 57
>03_02_0315 -
7401708-7401860,7401962-7402123,7402211-7402279,
7403332-7403596,7404613-7404737,7404826-7404933,
7405102-7405249,7406013-7406065
Length = 360
Score = 34.3 bits (75), Expect = 0.077
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 KQRLSNVKHKILILSGKGGVGK-STVTSLIGHGLASMS 391
K + NV +++ GKGGVGK STV S++G +A++S
Sbjct: 63 KLKEENVSTLTILVMGKGGVGKSSTVNSIVGERVATVS 100
>06_01_0042 + 410061-410544,411401-411837
Length = 306
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 311 ILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDAD 424
+++ SGKGGVGK+T T+ + LA +S ++ +DAD
Sbjct: 39 VVVTSGKGGVGKTTTTANLAASLARLS--LSAVAVDAD 74
>12_01_0255 +
1888193-1888914,1890247-1890460,1890535-1890615,
1890753-1890842,1890950-1891036,1891553-1891653,
1891966-1892011,1892366-1892440,1892557-1892640,
1892721-1892936,1893216-1893358,1893488-1893629
Length = 666
Score = 30.7 bits (66), Expect = 0.95
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = -1
Query: 551 PTGTRSTSATSYP*-RKQGTTPSRSCGPAL-RGRPTLAAGSG----RRCRHRVYLRLYQD 390
P+ S + TS P R Q +P R+ P G T AA + RRC HR + R +
Sbjct: 11 PSSFSSANPTSTPRPRAQTLSPFRAAAPRFSHGLATAAAAANPSASRRCYHRAFARPVRA 70
Query: 389 SLMQDR 372
S+ Q R
Sbjct: 71 SMAQPR 76
>11_01_0257 +
1972111-1972832,1974214-1974427,1974502-1974582,
1974720-1974809,1974911-1974997,1975484-1975584,
1975892-1975937,1976272-1976346,1976459-1976542,
1976620-1976861,1977067-1977258,1977391-1977532
Length = 691
Score = 30.7 bits (66), Expect = 0.95
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = -1
Query: 551 PTGTRSTSATSYP*-RKQGTTPSRSCGPAL-RGRPTLAAGSG----RRCRHRVYLRLYQD 390
P+ S + TS P R Q +P R+ P G T AA + RRC HR + R +
Sbjct: 11 PSSFSSANPTSTPRPRAQTLSPFRAAAPRFSHGLATAAAAANPSASRRCYHRAFARPVRA 70
Query: 389 SLMQDR 372
S+ Q R
Sbjct: 71 SMAQPR 76
>07_01_1147 + 10771305-10771619,10771991-10772077
Length = 133
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 408 VYSMPTSAARASRECWASAESRSTTPARGG 497
V + P +AA S E WA+A R+TTP+ G
Sbjct: 72 VAASPAAAAAGSGEQWATATGRATTPSNLG 101
>09_04_0258 - 16175258-16176069,16176111-16176414
Length = 371
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 325 R*RGGRKKYCDITNWARSCINES*YKRRYTRCR--HLRPEPAASVGRPRRAG 474
R R GR+ D+ + A +C ++ RR T R H +PE +S RP RAG
Sbjct: 167 RQRHGRRHDDDVDDAAAACAADAEGARRPTDQRRGHGQPEATSSSARPARAG 218
>06_01_0963 +
7411944-7412396,7412677-7412736,7412828-7413010,
7413259-7413339,7414219-7414541,7414961-7415084
Length = 407
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +2
Query: 413 LDADICGPSQPRVLGVRGEQVHNS-----GSGWSPVYVTDNLSLMSIGFLLGSPDDA-VI 574
+D+ + P + L + + V +S G+GW +VTD + M +GFL P+ A +I
Sbjct: 206 IDSTLASPINQKPLTLGADVVLHSHHQVIGAGWETPWVTDFTTGMGVGFLNWHPNAAYMI 265
Query: 575 WRGPK 589
RG K
Sbjct: 266 IRGLK 270
>10_08_0965 + 21915842-21916906
Length = 354
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 372 CPISDVTVLFPTPPLPDKIRILCFTLERRCFISSTAGSG*DASPD 238
CP+ ++ P PPLPD +R+ ++ R ++A + A P+
Sbjct: 167 CPLCRASIALPHPPLPDLLRVELGSVSSRRSNPNSAAAVASAPPE 211
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/70 (32%), Positives = 29/70 (41%)
Frame = +2
Query: 158 QHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQRLSNVKHKILILSGKGG 337
+H P + E + A G S+PD + L LS K + L G G
Sbjct: 412 EHKPSMEREGGVELEAVTGRVELRDVEFSYPSRPDVGI-LRGLSLSVPAGKTIALVGSSG 470
Query: 338 VGKSTVTSLI 367
GKSTV SLI
Sbjct: 471 SGKSTVVSLI 480
>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
4521632-4521723,4522226-4522342,4522641-4522704,
4523175-4523228,4523579-4523666,4523788-4524023,
4525258-4525478,4525634-4525827,4525938-4525995,
4526771-4526824,4526851-4527473,4527580-4527640,
4528417-4528590,4528803-4529063,4529201-4529320,
4529388-4530022,4530062-4530828,4530915-4531012,
4531101-4531155,4531230-4531318
Length = 2010
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +2
Query: 128 NMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEA--SQPDPAVELIKQRLSNV 301
N + + H P Q+ D G S+ G PNQ + S +A P + +QR N
Sbjct: 1806 NQPKIYGSQMPHSP-IQTSDVGSQSSMQGSPNQTMLTSQQAPLHSSSPLAQQQQQRYMNP 1864
Query: 302 KH 307
H
Sbjct: 1865 SH 1866
>08_01_0102 -
735359-735370,735371-735455,735531-735616,735697-735779,
736790-737048,737132-737300,738554-738698,738782-739004
Length = 353
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 606 LIIPFFFGPLHMTASSGLPNRNPIDI 529
L++P+F PLH TA++ + +P D+
Sbjct: 29 LLLPYFSPPLHATAAASPSSHSPFDV 54
>03_02_0930 - 12480983-12481888
Length = 301
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 125 SNMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQ 226
S+ S+VP AP+ P + G + C CPN+
Sbjct: 38 SDASAVPPAAPRQPPAAAAPAGGLSPCCCYCPNR 71
>12_02_0496 +
19704429-19704613,19705874-19706736,19706764-19706951,
19707190-19708200
Length = 748
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/32 (31%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +2
Query: 275 LIKQRLSNVKHK-ILILSGKGGVGKSTVTSLI 367
++++ L +H+ ++++ G GG+GK+T+ SL+
Sbjct: 85 IMERLLQPTEHREVIVIVGMGGIGKTTLASLV 116
>07_01_0939 + 7939716-7940220,7940675-7941564
Length = 464
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 278 IKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLA 382
+KQR +K KILI GG + + L+ H L+
Sbjct: 429 VKQRADELKKKILICLKNGGSTQQAIDKLVDHMLS 463
>03_06_0680 - 35497868-35497884,35498058-35501961
Length = 1306
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +2
Query: 101 INSRQIVISNMSSVP-DNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVEL 277
+N +++I+ M++ + P+ P S K + NI + +
Sbjct: 126 VNEMEVLIAEMNAFRFEFRPE--PPISSMKWRKTDCKISNLSMNIAIRSRSEDKQKIINT 183
Query: 278 IKQRLSNVKHKILILSGKGGVGKSTVTSLI 367
+ ++SN +L + G GG+GK+T+ LI
Sbjct: 184 LLAQVSNRDLTVLPIVGMGGMGKTTLVQLI 213
>11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229
Length = 632
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 275 LIKQRLSNVKHKILILSGKGGVGKSTVTSLI 367
LIK+ + +L + G+GG+GKST+ +
Sbjct: 197 LIKKSAFEASYMVLAIVGQGGMGKSTLAQYV 227
>10_08_0041 - 14374684-14377339,14377371-14378233
Length = 1172
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 302 KHKILILSGKGGVGKSTVTSLIGHGL--ASMSPDINVGILDADICGPSQPRVLGVRGEQV 475
+H +++ +G G + V GL A + + +LDA G Q VL + +
Sbjct: 416 QHNLVVDAGAGAKQQKLVLDAADDGLHLAGVGGKQHNLVLDAGAGGKQQKLVLDAADDGL 475
Query: 476 HNSGSGW 496
H +G GW
Sbjct: 476 HLAGVGW 482
>08_02_0075 - 11953723-11956203,11958213-11958512
Length = 926
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 269 VELIKQRLSNVKHKILI-LSGKGGVGKSTVTSLIGH 373
+ELI S+ + +++ + G GGVGK+T+ L+ H
Sbjct: 198 IELINSAASSDQELLVVPIVGAGGVGKTTLARLVYH 233
>08_01_0931 +
9177466-9177493,9178205-9178317,9178418-9178759,
9178935-9179139,9179322-9179344
Length = 236
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +1
Query: 400 KRRYTRCRHLRPEPAASVGRPRRAGPQLRLGVVPCLRYG*LVADVDRVPVGQSR 561
KRR+ RCR + AAS+ RA + V P LVAD D +P R
Sbjct: 58 KRRWLRCRWRQGRAAASLDLTVRADWRRTTAVAP------LVADEDALPAASGR 105
>07_03_0028 + 12611734-12612522
Length = 262
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +2
Query: 110 RQIVISNMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQR 289
+Q ++ ++ + + PGT S G + P + + A +S P P + +
Sbjct: 19 QQATVAATATATSDGIRDSPGTSSPFRGGGGSTTPTPQRPVKAGSSSSPPPPPTTAMDKT 78
Query: 290 LSNVKHKILIL 322
LS+V + +L
Sbjct: 79 LSSVANLAKLL 89
>04_04_1197 +
31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 242 GEASQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGI 412
G A++ + +LI SN +L + G GG+GK+T+ L+ L S NV I
Sbjct: 318 GRAAEMETIKQLIMSNRSN-GITVLPIVGNGGIGKTTLAQLVCKDLVIKS-QFNVKI 372
>02_04_0109 + 19812544-19814474,19814574-19814607
Length = 654
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 337 GRKKYCDITNWARSCINES*YKRRYTRCRHLRPE-PAASVGRPR 465
GRK++ D T+ A N S +R+TRC P+ P S R R
Sbjct: 335 GRKQFSDRTSHAHRLSNVSREDKRHTRCSESIPQTPKESRKRSR 378
>12_01_0646 + 5474234-5476189
Length = 651
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 284 QRLSNVKH-KILILSGKGGVGKSTVTSLIGH 373
Q N H I+ + G GG+GK+T+ LI H
Sbjct: 214 QDAKNNNHVPIMSIVGHGGIGKTTLAQLISH 244
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 281 KQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDIN 403
KQ S K K ++LSG G+GK+T ++ L + ++N
Sbjct: 443 KQADSGAK-KAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVN 482
>08_02_0076 +
11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 242 GEASQPDPAV-ELIKQRLSNVKHKILILSGKGGVGKSTVTSLI 367
G Q D + +L + + K IL + G GG+GK+T+ L+
Sbjct: 260 GRDQQRDLIISKLTSEECARKKLSILAIIGDGGIGKTTLAKLV 302
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 27.9 bits (59), Expect = 6.7
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +2
Query: 308 KILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILD--ADICGPSQPRVLGVRGEQVH- 478
KI+ LSG GVGK+++ I L +VG L A+I G + V + G+ V
Sbjct: 462 KIICLSGPPGVGKTSIGRSIARALNRKFYRFSVGGLADVAEIKGHRRTYVGAMPGKMVQC 521
Query: 479 -NSGSGWSPVYVTDNLSLMSIGFLLGSPDDAVI 574
S +P+ + D + + G G P A++
Sbjct: 522 LKSVGTANPLVLIDEIDKLGRGH-SGDPASALL 553
>06_03_0783 -
24546403-24546765,24547202-24547262,24547899-24548004,
24548118-24551600,24553134-24553179
Length = 1352
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 296 NVKHKILILSGKGGVGKSTVTSLI 367
+V +++ + G GG+GK+T+T LI
Sbjct: 243 SVSPEVITIVGTGGIGKTTLTQLI 266
>05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351
Length = 1007
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 293 SNVKHKILILSGKGGVGKSTVTSLI 367
++V IL + G GGVGK+T+T L+
Sbjct: 191 NHVNLSILPIVGMGGVGKTTLTQLV 215
>04_04_1166 - 31427523-31428154,31428888-31429020
Length = 254
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 443 PRVLGVRGEQVHNSGSGWSPVYVTDNLSLMSIGFLLGSPDDAVIWRGP 586
P+ LGV G V+ GS +PV V + L ++G D A + P
Sbjct: 66 PKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNP 113
>03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435
Length = 415
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 314 LILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLG 457
+++ G G GKST L + PDI V + D P P V+G
Sbjct: 106 VMIMGDRGTGKSTTV----RSLVDLLPDIRVVVGDPFNSDPDDPEVMG 149
>11_01_0791 + 6627961-6630702
Length = 913
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 305 HKILILSGKGGVGKSTV 355
HK++ +SG GG+GK+T+
Sbjct: 192 HKVITVSGMGGLGKTTL 208
>07_01_1011 + 8571297-8571517,8571943-8572148,8572219-8572334
Length = 180
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = -1
Query: 554 CPTGTRSTSATSYP*RKQGTTPSRSCGPALRGRPTLAAGSGRRCRHRVYLRLYQDSLMQD 375
CP T ST+A G P R+ GP + G+G+R H + D +++
Sbjct: 56 CPRSTESTAAV-------GFDPWRNSGPVTQPVGRGGGGNGQRWFHNFGTTVAGDDGVEE 108
Query: 374 RAQLVMSQY 348
A LV Y
Sbjct: 109 EATLVAMLY 117
>07_01_0730 + 5562805-5563254
Length = 149
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 495 HPEPELWTCSPRTPNTRGWLGPQMSASSIPT--FISGLIDARPCPISDVTVLFPTPPLPD 322
HP+P SPR+ +GP S+I + GL+ R CP+ ++L +P D
Sbjct: 83 HPDP-----SPRSTAGSAPIGPVADGSAIDNSAVLLGLLRHRGCPLPRHSILLCSPVAAD 137
Query: 321 KIRIL 307
+ ++
Sbjct: 138 PMPVV 142
>03_06_0404 + 33692534-33693607
Length = 357
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 263 PAVELIKQRLSNVKHKILILSGKGGVGKS 349
P L+ + + VKHK +++ G G GKS
Sbjct: 38 PVAPLVLRHGAGVKHKAVVVMGATGTGKS 66
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 406 RYTRCRHLRPEPAASVGRPRRAGPQLRLGVVP 501
R+TR HL+ P +P R GP+ R P
Sbjct: 167 RWTRAYHLKVPPPPMAPQPPRGGPRQRYQPTP 198
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 492 PEPELWTCSPRTPNTRGWLGPQMSA-SSIPTFISGLIDARPCPISDVTVLFPTPPLP 325
PE E SP T + L P S SS P +G + P P VT P PPLP
Sbjct: 33 PEAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLP 89
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 278 IKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGL 379
IK+R +V ++L G G GKST++SL+G L
Sbjct: 147 IKERKESVT---VLLCGTSGCGKSTLSSLLGSRL 177
>02_05_0385 -
28506326-28506891,28506993-28507405,28507496-28507743,
28507820-28508480,28508572-28509498,28509588-28509847,
28509943-28510143,28515547-28515633,28516200-28516375,
28516465-28516519,28516623-28516910
Length = 1293
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +2
Query: 251 SQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLI 367
S+PD + L + L KI+ L G G GKSTV SLI
Sbjct: 416 SRPDVVI-LDRFSLDFPAGKIVALVGGSGSGKSTVVSLI 453
>02_01_0135 +
967172-967229,968316-968657,968936-969015,969063-969698,
969819-971527,971563-972514,972821-973273,974303-974497
Length = 1474
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 242 GEASQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGH 373
G ++ D +EL+ ++ + +L L G GGVGK+T+ + H
Sbjct: 241 GRDTERDNIIELLT-KVKSCDLGVLPLVGVGGVGKTTLARFVYH 283
>01_03_0284 -
14595643-14595663,14595978-14596018,14596379-14596732,
14597023-14597494,14597524-14600001
Length = 1121
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 245 EASQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLI 367
E S+ +++K L N +L + G GG+GK+T LI
Sbjct: 176 ERSRAAEKQKIVKALLENDDIMVLPIVGMGGLGKTTFAKLI 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,469,747
Number of Sequences: 37544
Number of extensions: 444948
Number of successful extensions: 1787
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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