Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0380
(611 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50960.1 68418.m06320 nucleotide-binding family protein simil... 210 4e-55
At4g19540.1 68417.m02874 expressed protein 64 9e-11
At3g24430.1 68416.m03066 expressed protein contains Pfam profile... 56 2e-08
At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 39 0.003
At5g24020.1 68418.m02822 septum site-determining protein (MIND) ... 36 0.028
At3g54950.1 68416.m06092 patatin-related low similarity to patat... 34 0.065
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 33 0.15
At1g12280.1 68414.m01420 disease resistance protein (CC-NBS-LRR ... 33 0.15
At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t... 33 0.15
At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /... 32 0.34
At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /... 32 0.34
At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /... 32 0.34
At5g63020.1 68418.m07906 disease resistance protein (CC-NBS-LRR ... 31 0.46
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ... 31 0.46
At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR ... 31 0.60
At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR ... 31 0.60
At1g01910.2 68414.m00109 anion-transporting ATPase, putative sim... 30 1.1
At1g01910.1 68414.m00108 anion-transporting ATPase, putative sim... 30 1.1
At3g10350.1 68416.m01241 anion-transporting ATPase family protei... 30 1.4
At3g05790.1 68416.m00650 Lon protease, putative similar to Lon p... 29 2.4
At2g32850.2 68415.m04025 protein kinase family protein contains ... 29 2.4
At2g32850.1 68415.m04024 protein kinase family protein contains ... 29 2.4
At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR ... 29 3.2
At5g48620.1 68418.m06013 disease resistance protein (CC-NBS-LRR ... 28 4.2
At4g26680.1 68417.m03844 pentatricopeptide (PPR) repeat-containi... 28 4.2
At1g68890.1 68414.m07884 menaquinone biosynthesis protein-relate... 28 4.2
At5g43740.2 68418.m05348 disease resistance protein (CC-NBS-LRR ... 28 5.6
At5g43740.1 68418.m05347 disease resistance protein (CC-NBS-LRR ... 28 5.6
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 28 5.6
At5g25090.1 68418.m02973 plastocyanin-like domain-containing pro... 28 5.6
At4g25515.1 68417.m03679 transcriptional co-regulator family pro... 28 5.6
At4g03140.1 68417.m00427 short-chain dehydrogenase/reductase (SD... 28 5.6
At3g54540.1 68416.m06035 ABC transporter family protein similar ... 28 5.6
At5g25420.1 68418.m03016 xanthine/uracil permease family protein... 27 7.4
At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT d... 27 7.4
At3g24255.1 68416.m03045 expressed protein 27 7.4
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 27 7.4
At2g16790.1 68415.m01925 shikimate kinase family protein similar... 27 7.4
At1g71890.1 68414.m08311 sucrose transporter / sucrose-proton sy... 27 7.4
At1g66570.1 68414.m07564 sucrose transporter, putative / sucrose... 27 7.4
At1g66090.1 68414.m07501 disease resistance protein (TIR-NBS cla... 27 7.4
At1g61300.1 68414.m06909 disease resistance protein (NBS-LRR cla... 27 7.4
At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR... 27 7.4
At5g59500.1 68418.m07457 expressed protein 27 9.8
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 27 9.8
At4g20910.1 68417.m03031 double-stranded RNA binding protein-rel... 27 9.8
At4g18480.1 68417.m02741 magnesium-chelatase subunit chlI, chlor... 27 9.8
At2g27820.1 68415.m03373 prephenate dehydratase family protein 27 9.8
>At5g50960.1 68418.m06320 nucleotide-binding family protein similar
to Nucleotide-binding protein 1 (NBP 1) (SP:Q9R060) [Mus
musculus]; contains Pfam PF00991 : ParA family ATPase
Length = 350
Score = 210 bits (514), Expect = 4e-55
Identities = 93/157 (59%), Positives = 121/157 (77%)
Frame = +2
Query: 140 VPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQRLSNVKHKILI 319
+P++A +HCPG QSE AGK+ +CAGCPNQ CA+ PDP + I +R+S VKHKIL+
Sbjct: 6 IPEDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKG-PDPDLVAIAERMSTVKHKILV 64
Query: 320 LSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGEQVHNSGSGWS 499
LSGKGGVGKST ++ + LA M D VG++D DICGPS P++LG+ G+++H S GWS
Sbjct: 65 LSGKGGVGKSTFSAQLSFALAGM--DHQVGLMDIDICGPSIPKMLGLEGQEIHQSNLGWS 122
Query: 500 PVYVTDNLSLMSIGFLLGSPDDAVIWRGPKKNGMIKQ 610
PVYV DNL +MSIGF+L + D+AVIWRGP+KNG+IKQ
Sbjct: 123 PVYVEDNLGVMSIGFMLPNSDEAVIWRGPRKNGLIKQ 159
>At4g19540.1 68417.m02874 expressed protein
Length = 313
Score = 63.7 bits (148), Expect = 9e-11
Identities = 38/100 (38%), Positives = 55/100 (55%)
Frame = +2
Query: 287 RLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRG 466
RL VK I + SGKGGVGKS+ + LA+ ++ +G+LDAD+ GPS P ++ +
Sbjct: 38 RLHGVKDIIAVASGKGGVGKSSTAVNLAVALANKC-ELKIGLLDADVYGPSVPIMMNINQ 96
Query: 467 EQVHNSGSGWSPVYVTDNLSLMSIGFLLGSPDDAVIWRGP 586
+ N PV + MS+G LL D ++WRGP
Sbjct: 97 KPQVNQDMKMIPV-ENYGVKCMSMG-LLVEKDAPLVWRGP 134
>At3g24430.1 68416.m03066 expressed protein contains Pfam profile
PF01883: Domain of unknown function
Length = 532
Score = 55.6 bits (128), Expect = 2e-08
Identities = 40/128 (31%), Positives = 64/128 (50%)
Frame = +2
Query: 227 NICASGEASQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINV 406
N+ S + ++P A +L LS + + I + S KGGVGKSTV + + LA M V
Sbjct: 152 NVTMSAQPAKPIFAGQL-PFGLSRISNIIAVSSCKGGVGKSTVAVNLAYTLAGMG--ARV 208
Query: 407 GILDADICGPSQPRVLGVRGEQVHNSGSGWSPVYVTDNLSLMSIGFLLGSPDDAVIWRGP 586
GI DAD+ GPS P ++ ++ + T+ + + + F A++ RGP
Sbjct: 209 GIFDADVYGPSLPTMVNPE-SRILEMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIM-RGP 266
Query: 587 KKNGMIKQ 610
+G+I Q
Sbjct: 267 MVSGVINQ 274
>At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 843
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +2
Query: 260 DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPS 439
D +E + L ++++L + G GGVGK+T+ +LI + +S D +V I
Sbjct: 161 DTTLEKTWESLRKDENRMLGIFGMGGVGKTTLLTLINNKFVEVSDDYDVVIWVESSKDAD 220
Query: 440 QPRVLGVRGEQVHNSGSGWS 499
++ GE++H + WS
Sbjct: 221 VGKIQDAIGERLHICDNNWS 240
>At5g24020.1 68418.m02822 septum site-determining protein (MIND)
identical to MinD [Arabidopsis thaliana] GI:6759277;
contains Pfam PF00991 : ParA family ATPase
Length = 326
Score = 35.5 bits (78), Expect = 0.028
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 311 ILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADI 427
++I SGKGGVGK+T T+ +G LA +V +DAD+
Sbjct: 61 VVITSGKGGVGKTTTTANVGLSLARYG--FSVVAIDADL 97
>At3g54950.1 68416.m06092 patatin-related low similarity to patatin
[GI:169500][Solanum tuberosum]; contains Patatin domain
PF01734
Length = 488
Score = 34.3 bits (75), Expect = 0.065
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 251 SQPDPAVELIKQRLSNVKHKILILS----GKGGVGKSTVTSLIGHGLASMSPDINVGILD 418
S+P+PA ++ + N + KI ILS G G+ + + H L S S D N I D
Sbjct: 78 SKPEPANSVVAGSIKNQRGKICILSIDGGGMRGILPGKALAYLEHALKSKSGDPNARIAD 137
Query: 419 -ADICGPSQPRVLGVRGEQVHNSGSGWSPVYVTDN 520
D+ S + G+ + S G P++ D+
Sbjct: 138 YFDVAAGS--GIGGIYTAMLFGSRDGNRPIFKADD 170
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 311 ILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGEQVHNSGS 490
+L + G GGVGK+T+ S I + ++S D ++ I P+ R+ G+++
Sbjct: 177 LLGIYGMGGVGKTTLLSQINNKFRTVSNDFDIAIWVVVSKNPTVKRIQEDIGKRLDLYNE 236
Query: 491 GW 496
GW
Sbjct: 237 GW 238
>At1g12280.1 68414.m01420 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 894
Score = 33.1 bits (72), Expect = 0.15
Identities = 26/95 (27%), Positives = 43/95 (45%)
Frame = +2
Query: 269 VELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPR 448
+E + RL+ +I+ L G GGVGK+T+ + I + + V I P R
Sbjct: 164 LERVWTRLTEDGDEIVGLYGMGGVGKTTLLTRINNKFSEKCSGFGVVIWVVVSKSPDIHR 223
Query: 449 VLGVRGEQVHNSGSGWSPVYVTDNLSLMSIGFLLG 553
+ G G+++ G W V +N + I +LG
Sbjct: 224 IQGDIGKRLDLGGEEWD--NVNENQRALDIYNVLG 256
>At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to
atToc33 protein (GI:11557973) [Arabidopsis thaliana];
Carboxyl-terminal end highly similar to GTP-binding
protein SP:U43377, location of EST gb|AA394770 and
gb|R30089; identical to cDNA for chloroplast atToc33
protein GI:11557972
Length = 297
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 281 KQRLSNVKHKILILSGKGGVGKS-TVTSLIGHGLASMSP 394
K + ++ +++ GKGGVGKS TV SLIG + +SP
Sbjct: 28 KLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSP 66
>At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 31.9 bits (69), Expect = 0.34
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 KQRLSNVKHKILILSGKGGVGK-STVTSLIGHGLASMS 391
K + +V +++ GKGGVGK STV S+IG A++S
Sbjct: 30 KYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVS 67
>At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 31.9 bits (69), Expect = 0.34
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 KQRLSNVKHKILILSGKGGVGK-STVTSLIGHGLASMS 391
K + +V +++ GKGGVGK STV S+IG A++S
Sbjct: 30 KYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVS 67
>At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 31.9 bits (69), Expect = 0.34
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 KQRLSNVKHKILILSGKGGVGK-STVTSLIGHGLASMS 391
K + +V +++ GKGGVGK STV S+IG A++S
Sbjct: 30 KYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVS 67
>At5g63020.1 68418.m07906 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 888
Score = 31.5 bits (68), Expect = 0.46
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 260 DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGI 412
DP +E RL + IL L G GGVGK+T+ S I + + + + ++ I
Sbjct: 159 DPMLESAWNRLMEDEIGILGLHGMGGVGKTTLLSHINNRFSRVGGEFDIVI 209
>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 941
Score = 31.5 bits (68), Expect = 0.46
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 269 VELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGI 412
VE+ + L N + + L L G GGVGK+T+ + I + + + +V I
Sbjct: 248 VEMAWKSLMNDEIRTLCLHGMGGVGKTTLLACINNKFVELESEFDVVI 295
>At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 31.1 bits (67), Expect = 0.60
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 272 ELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGH 373
EL+ + N H+++ ++G GG+GK+T+ + H
Sbjct: 174 ELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFH 207
>At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 31.1 bits (67), Expect = 0.60
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 272 ELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGH 373
EL+ + N H+++ ++G GG+GK+T+ + H
Sbjct: 174 ELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFH 207
>At1g01910.2 68414.m00109 anion-transporting ATPase, putative
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase
Length = 353
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 248 ASQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDI 400
A P+ V+ I L K + + GKGGVGK+T +S++ LAS+ +
Sbjct: 3 ADLPEATVQNI---LDQESLKWVFVGGKGGVGKTTCSSILAICLASVRSSV 50
>At1g01910.1 68414.m00108 anion-transporting ATPase, putative
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase
Length = 353
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 248 ASQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDI 400
A P+ V+ I L K + + GKGGVGK+T +S++ LAS+ +
Sbjct: 3 ADLPEATVQNI---LDQESLKWVFVGGKGGVGKTTCSSILAICLASVRSSV 50
>At3g10350.1 68416.m01241 anion-transporting ATPase family protein
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase; contains non-consensus GA
donor splice site at intron 5
Length = 411
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 251 SQPDPAVELIKQRLSNVKHKILILSGKGGVGKST 352
+ P + + +S K K +L GKGGVGK++
Sbjct: 69 ASPTETISEFDEMVSGTKRKYYMLGGKGGVGKTS 102
>At3g05790.1 68416.m00650 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 942
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +2
Query: 308 KILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILD--ADICGPSQPRVLGVRGEQVH- 478
KI+ LSG GVGK+++ I L +VG L A+I G + + + G+ V
Sbjct: 450 KIICLSGPTGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHRRTYIGAMPGKMVQC 509
Query: 479 --NSGSGWSPVYVTDNLSLMSIGFLLGSPDDAVI 574
N G+ +P+ + D + + + G P A++
Sbjct: 510 LKNVGTE-NPLVLIDEIDKLGVRGHHGDPASAML 542
>At2g32850.2 68415.m04025 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 670
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 281 KQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGV 460
++ L V +I +L K G V +L HG+ M + +L D CG S VL
Sbjct: 64 EESLELVMKEISVL--KSLKGHPNVVTLYAHGILDMGRNKKEALLAMDFCGKSLVDVLEN 121
Query: 461 RG 466
RG
Sbjct: 122 RG 123
>At2g32850.1 68415.m04024 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 650
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 281 KQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGV 460
++ L V +I +L K G V +L HG+ M + +L D CG S VL
Sbjct: 64 EESLELVMKEISVL--KSLKGHPNVVTLYAHGILDMGRNKKEALLAMDFCGKSLVDVLEN 121
Query: 461 RG 466
RG
Sbjct: 122 RG 123
>At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 906
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 272 ELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGH 373
EL+ + N +++ +SG GG+GK+T+ + H
Sbjct: 172 ELVDHLVENDSVQVVSVSGMGGIGKTTLARQVFH 205
>At5g48620.1 68418.m06013 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 908
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 272 ELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGH 373
EL+ + N ++++ ++G GG+GK+T+ + H
Sbjct: 174 ELVGHLVENDIYQVVSIAGMGGIGKTTLARQVFH 207
>At4g26680.1 68417.m03844 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 521
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 207 VLDALIKTFAHLEKHLNLT 263
V D+L KTFAHL+K N T
Sbjct: 170 VFDSLFKTFAHLKKFRNAT 188
>At1g68890.1 68414.m07884 menaquinone biosynthesis protein-related
similar to menaquinone biosynthesis protein menD
[SP|P17109][E. coli] ; Pfam HMM hit:
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic
acid synthase / 2-oxoglutarate decarboxylase
Length = 894
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 212 GCPNQNICASGEAS--QPDPAVELIKQRLSNVKHKILILSGKGG 337
GC + +C G+ S + ++KQR++ IL+++ +GG
Sbjct: 814 GCKKRVVCVVGDISFLHDTNGLAILKQRIARKPMTILVINNRGG 857
>At5g43740.2 68418.m05348 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 862
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 260 DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGI 412
D VE+ L N + L L G GGVGK+T+ + + + + +V I
Sbjct: 156 DKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVI 206
>At5g43740.1 68418.m05347 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 862
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 260 DPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGI 412
D VE+ L N + L L G GGVGK+T+ + + + + +V I
Sbjct: 156 DKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVI 206
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 27.9 bits (59), Expect = 5.6
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +2
Query: 308 KILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILD--ADICGPSQPRVLGVRGEQVH- 478
KI+ LSG GVGK+++ I L +VG L A+I G + V + G+ V
Sbjct: 458 KIICLSGPPGVGKTSIGRSIARALNRKFFRFSVGGLADVAEIKGHRRTYVGAMPGKMVQC 517
Query: 479 -NSGSGWSPVYVTDNLSLMSIGFLLGSPDDAVI 574
S +P+ + D + + G G P A++
Sbjct: 518 LKSVGTANPLVLIDEIDKLGRGH-AGDPASALL 549
>At5g25090.1 68418.m02973 plastocyanin-like domain-containing
protein
Length = 186
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 500 GTTPSRSCGPALRGRPTLAAGSG 432
G++PS + PAL G PT+A SG
Sbjct: 140 GSSPSPAPSPALLGAPTVAPASG 162
>At4g25515.1 68417.m03679 transcriptional co-regulator family
protein contains similarity to GP|18033922|gb|AAL57277
SEUSS transcriptional co-regulator [Arabidopsis
thaliana]
Length = 471
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 344 FRPPLYRTRSEFCALHWRDVVLSVLLRGQVEMLLQM-RKC 228
F P L EFCA +++L L+ QV LLQ+ +KC
Sbjct: 90 FSPDLKILSWEFCARRHEELLLRRLIAPQVNQLLQVAQKC 129
>At4g03140.1 68417.m00427 short-chain dehydrogenase/reductase (SDR)
family protein similar to stem secoisolariciresinol
dehydrogenase GI:13752458 from {Forsythia x intermedia};
similar to sex determination protein tasselseed 2
SP:P50160 from [Zea mays]
Length = 279
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 314 LILSGKGGVGKSTVTSLIGHGLASMSPDI--NVGILDADICGPS 439
LI G G+GK+T I HG + DI +G GPS
Sbjct: 20 LITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPS 63
>At3g54540.1 68416.m06035 ABC transporter family protein similar to
ABC50 GI:10863747 from [Rattus norvegicus]
Length = 723
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 272 ELIKQRLSNVKH-KILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICG 433
EL+K + H K L G G+GKST+ L+ + +I+V +++ ++ G
Sbjct: 176 ELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVG 230
>At5g25420.1 68418.m03016 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 419
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 432 PQMSASSIPTFISGLIDARPCPISDVTVLF 343
PQ + +S T +GLI PCP D+T F
Sbjct: 245 PQTTQTSCRTDRTGLITNTPCPTFDITDSF 274
>At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT
domain-containing protein contains Pfam profiles:
PF00533 BRCA1 C Terminus (BRCT) domain, PF00004 ATPase
family associated with various cellular activities (AAA)
Length = 956
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 308 KILILSGKGGVGKSTVTSLIGHGLASMSPDIN 403
K ++LSG G+GK+T L+ L + ++N
Sbjct: 394 KAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVN 425
>At3g24255.1 68416.m03045 expressed protein
Length = 836
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 419 ADICGPSQPRVLGVRGEQVHNSGSGWS 499
+D+C P LG+R + N GS WS
Sbjct: 209 SDVCTPKDEGGLGIRSLKEANKGSFWS 235
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 27.5 bits (58), Expect = 7.4
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 308 KILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILD--ADICGPSQPRVLGVRGEQV 475
KI+ LSG GVGK+++ I L +VG L A+I G Q V + G+ V
Sbjct: 441 KIICLSGPPGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHCQTYVGAMPGKMV 498
>At2g16790.1 68415.m01925 shikimate kinase family protein similar to
thermosensitive glucokinase from Escherichia coli
[SP|P39208] [SP|P46859]; contains Pfam profile PF01202:
shikimate kinase
Length = 189
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 293 SNVKHKILILSGKGGVGKSTVTSLIGHGLA 382
++V K++ + G G GKST+ ++G L+
Sbjct: 5 NDVTGKVIAIMGVSGAGKSTIGKMLGKALS 34
>At1g71890.1 68414.m08311 sucrose transporter / sucrose-proton
symporter (SUC5) nearly identical to sucrose transporter
[Arabidopsis thaliana] GI:12057172
Length = 512
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 444 GWLGPQMSASSIPTFISGLIDARPCPISDVTVLFPTPPLPD 322
G L Q ++P+F+ G I A + +TVL P+PP PD
Sbjct: 463 GPLDAQFGGGNLPSFVVGAIAAAVSGVLALTVL-PSPP-PD 501
>At1g66570.1 68414.m07564 sucrose transporter, putative /
sucrose-proton symporter, putative similar to
sucrose-proton symporter SUC1 [Arabidopsis thaliana]
GI:407094, sucrose transporter [Arabidopsis thaliana]
GI:12057172; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 491
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 520 VIRNVNRGPPRAGVVDLLSADAQHSRLARA 431
V N +GP RA + DL + DAQ +R A A
Sbjct: 152 VANNTLQGPCRAFLGDLAAGDAQKTRTANA 181
>At1g66090.1 68414.m07501 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 429
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 302 KHKILILSGKGGVGKSTVTSLIGHGLASMS 391
K KI+ +SG G+GKST+ + H L S S
Sbjct: 219 KVKIVGISGPAGIGKSTIARAL-HNLLSSS 247
>At1g61300.1 68414.m06909 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 762
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 287 RLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGI 412
RL + I+ L G GGVGK+T+ I + A MS ++ I
Sbjct: 55 RLMEDRVGIMGLHGMGGVGKTTLFKKIHNKFAKMSSRFDIVI 96
>At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 897
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 290 LSNVKHKILILSGKGGVGKSTVTSLIGHGLASM 388
L N KI+ +SG G+GKST+ + + L++M
Sbjct: 202 LKNDGVKIVGISGPAGIGKSTIATALHGRLSNM 234
>At5g59500.1 68418.m07457 expressed protein
Length = 396
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 486 PELWTCSPRTPNTRGWLGPQMSASS 412
P +W+C+P W+ P+ S SS
Sbjct: 56 PSIWSCAPFPVRKGSWVPPRCSISS 80
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 406 RYTRCRHLRPEPAASVGRPRRAGPQLRLGVVP 501
R+TR HL+ P +P R GP+ R+ P
Sbjct: 513 RWTRAYHLKVPPPPMPPQPPRGGPRQRILPTP 544
>At4g20910.1 68417.m03031 double-stranded RNA binding
protein-related / DsRBD protein-related contains weak
similarity to Pfam profile PF00035: Double-stranded RNA
binding motif
Length = 942
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 359 MSQYFFRPPLYRTRSEFCALHWRDVVLSVLL 267
M FF+PPL + R E+ H R+ S L+
Sbjct: 688 MEAAFFKPPLSKQRVEYALKHIRESSASTLV 718
>At4g18480.1 68417.m02741 magnesium-chelatase subunit chlI,
chloroplast / Mg-protoporphyrin IX chelatase (CHLI) (CS)
(CH42) identical to SP|P161127 Magnesium-chelatase
subunit chlI, chloroplast precursor (Mg-protoporphyrin
IX chelatase) (Protein CS/CH-42) {Arabidopsis thaliana}
Length = 424
Score = 27.1 bits (57), Expect = 9.8
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +2
Query: 314 LILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGEQVHNSGSG 493
+++ G G GKST L + P+INV D P P +GV + G
Sbjct: 115 VMIMGDRGTGKSTTV----RSLVDLLPEINVVAGDPYNSDPIDPEFMGVEVRERVEKGE- 169
Query: 494 WSPVYVTDNLSLMSIGFLLGSPDDAV 571
PV T + + LG+ +D V
Sbjct: 170 QVPVIAT---KINMVDLPLGATEDRV 192
>At2g27820.1 68415.m03373 prephenate dehydratase family protein
Length = 424
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 155 PQHCPGTQSEDAGKASA--CAGCPNQNICASGEASQPDPAVELIKQRLSNVKHKILILSG 328
P H P T + A + CAG + + + +S + ++ ++++ + + S
Sbjct: 6 PSHTPATVTTAARRRHVIHCAGKRSDSFSINSSSSDWQSSCAILSSKVNSQEQSESLSSN 65
Query: 329 KGGVGKSTVTSLIGHGLASMSPDINV 406
G V+++ GH + D+N+
Sbjct: 66 SNGSSSYHVSAVNGHNNGAGVSDLNL 91
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,236,032
Number of Sequences: 28952
Number of extensions: 321203
Number of successful extensions: 1086
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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