Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0375
         (552 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050529-1|AAH50529.1| 1050|Homo sapiens ankyrin repeat domain 2...    31   2.0  
AL834335-1|CAD39003.1|  407|Homo sapiens hypothetical protein pr...    31   2.0  
AK054561-1|BAB70755.1| 1060|Homo sapiens FLJ00040 protein protein.     31   2.0  

>BC050529-1|AAH50529.1| 1050|Homo sapiens ankyrin repeat domain 27
           (VPS9 domain) protein.
          Length = 1050

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +3

Query: 138 QKSFNFLICLVYENKIINEKNRSGNIPFPYRIISQRHYLVLVITLQH 278
           Q  F  + CL+  N   N+K+ SGN P  Y      H LV ++ LQH
Sbjct: 787 QGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALL-LQH 832


>AL834335-1|CAD39003.1|  407|Homo sapiens hypothetical protein
           protein.
          Length = 407

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +3

Query: 138 QKSFNFLICLVYENKIINEKNRSGNIPFPYRIISQRHYLVLVITLQH 278
           Q  F  + CL+  N   N+K+ SGN P  Y      H LV ++ LQH
Sbjct: 144 QGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALL-LQH 189


>AK054561-1|BAB70755.1| 1060|Homo sapiens FLJ00040 protein protein.
          Length = 1060

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +3

Query: 138 QKSFNFLICLVYENKIINEKNRSGNIPFPYRIISQRHYLVLVITLQH 278
           Q  F  + CL+  N   N+K+ SGN P  Y      H LV ++ LQH
Sbjct: 797 QGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALL-LQH 842


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,211,665
Number of Sequences: 237096
Number of extensions: 1358022
Number of successful extensions: 1996
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1996
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)