Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0375
         (552 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051817-1|AAK93241.1|  491|Drosophila melanogaster LD32366p pro...    28   7.3  
AE014134-1743|AAF52840.2|  491|Drosophila melanogaster CG5850-PA...    28   7.3  
AE014134-1742|ABI31304.1|  569|Drosophila melanogaster CG5850-PB...    28   7.3  

>AY051817-1|AAK93241.1|  491|Drosophila melanogaster LD32366p
           protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 337 CMLCGSLAESEFPLNKCVPYFLFISSYS-LVAYGVLWLRLDA*VNSLAQPMLNLREFFVI 513
           C LCG   E EF  N   PY + +++ S  VA   L L   A    L +PM  + +F  I
Sbjct: 195 CELCGVYGEGEFAGNVAFPYIVVVNNISQFVAMYCLVLFYRANKEDL-KPMKPIPKFLCI 253


>AE014134-1743|AAF52840.2|  491|Drosophila melanogaster CG5850-PA,
           isoform A protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 337 CMLCGSLAESEFPLNKCVPYFLFISSYS-LVAYGVLWLRLDA*VNSLAQPMLNLREFFVI 513
           C LCG   E EF  N   PY + +++ S  VA   L L   A    L +PM  + +F  I
Sbjct: 195 CELCGVYGEGEFAGNVAFPYIVVVNNISQFVAMYCLVLFYRANKEDL-KPMKPIPKFLCI 253


>AE014134-1742|ABI31304.1|  569|Drosophila melanogaster CG5850-PB,
           isoform B protein.
          Length = 569

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 337 CMLCGSLAESEFPLNKCVPYFLFISSYS-LVAYGVLWLRLDA*VNSLAQPMLNLREFFVI 513
           C LCG   E EF  N   PY + +++ S  VA   L L   A    L +PM  + +F  I
Sbjct: 195 CELCGVYGEGEFAGNVAFPYIVVVNNISQFVAMYCLVLFYRANKEDL-KPMKPIPKFLCI 253


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,553,196
Number of Sequences: 53049
Number of extensions: 431484
Number of successful extensions: 654
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)