Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0374
         (338 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7BMG3 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_Q9W433 Cluster: CG15899-PB; n=16; Eumetazoa|Rep: CG1589...    30   8.8  
UniRef50_Q7PQV4 Cluster: ENSANGP00000003024; n=1; Anopheles gamb...    30   8.8  
UniRef50_Q4Y240 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_A5K3Y1 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_P20103 Cluster: Nisin biosynthesis protein nisB; n=6; L...    30   8.8  

>UniRef50_A7BMG3 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 81

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = -2

Query: 205 TKIPSTTYNHKKKNYIKKFTATFCITR---LKTK*RAGSLLRGRATFTIHCWLL*LFLSR 35
           +KIP  + + K  + +  F+  F I+R   LKT    G L       ++   +L +F++ 
Sbjct: 13  SKIPKKSMSRKSGDQVMIFSCYFYISRSKTLKTGINVGCLSNFIIMLSLWFDILIIFINM 72

Query: 34  LANKYSLLI 8
            AN Y+LLI
Sbjct: 73  FANLYNLLI 81


>UniRef50_Q9W433 Cluster: CG15899-PB; n=16; Eumetazoa|Rep: CG15899-PB
            - Drosophila melanogaster (Fruit fly)
          Length = 2893

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 114  FVFRRVMQNVAVNFLM*FFFLWLYVVLGIFVLATRF 221
            FV  R M NVAV F +   F++++ +LG+ +   +F
Sbjct: 1057 FVMLRTMDNVAVFFSLLVLFIFIFSILGMNLFGCKF 1092


>UniRef50_Q7PQV4 Cluster: ENSANGP00000003024; n=1; Anopheles gambiae
            str. PEST|Rep: ENSANGP00000003024 - Anopheles gambiae
            str. PEST
          Length = 2264

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 114  FVFRRVMQNVAVNFLM*FFFLWLYVVLGIFVLATRF 221
            FV  R M NVA+ F +   F++++ +LG+ +   +F
Sbjct: 967  FVMLRTMDNVAIFFSLLILFIFIFSILGMNLFGCKF 1002


>UniRef50_Q4Y240 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1068

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 158 NVIFFFMVICSTRNLRFGDPF 220
           N+  +F +ICSTRN++F D F
Sbjct: 449 NLFDYFYIICSTRNMKFYDNF 469


>UniRef50_A5K3Y1 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3001

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -1

Query: 329  IYTHTYDEHVK*TISSSIFVKCY--YYSK*YIRDTKFI 222
            +YT TY  H+K T+ +SIFV  Y   +    + D KF+
Sbjct: 2068 LYTKTYIMHLKITVMTSIFVSIYNSIFKDYQMEDIKFV 2105


>UniRef50_P20103 Cluster: Nisin biosynthesis protein nisB; n=6;
           Lactococcus lactis|Rep: Nisin biosynthesis protein nisB
           - Lactococcus lactis subsp. lactis (Streptococcus
           lactis)
          Length = 993

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -2

Query: 331 EYTHTHTTSM*NKLFLRQFLL-NVXXXXXXXXXXXSLLKRVAKTKIPSTTYNHKKKNYIK 155
           EYT    T   NK+FL Q LL N             LLK+    K+  + Y + K++Y++
Sbjct: 28  EYTQVIETVSKNKVFLEQLLLANPKLYDVMQKYNAGLLKKKRVKKLFESIYKYYKRSYLR 87


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 320,942,605
Number of Sequences: 1657284
Number of extensions: 5522076
Number of successful extensions: 10654
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10650
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)