Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0374
         (338 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   0.65 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   1.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   3.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   8.0  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.4 bits (48), Expect = 0.65
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 205 TKIPSTTYNHKKKNYIKKFTATFCITRL 122
           T IP      + +NY+ + T  FCI  L
Sbjct: 483 TIIPKVLAMSRDQNYLYRMTCLFCINVL 510


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 272 VKCYYYSK*YIRD 234
           V CYY SK Y RD
Sbjct: 21  VVCYYNSKAYFRD 33


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 181 NHKKKNYIKKFTATF 137
           +HK  NYI +F A F
Sbjct: 403 SHKWLNYINQFEANF 417


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 161 VIFFFMVICSTRNLRF 208
           +  F ++IC  RNL +
Sbjct: 4   ITLFMIIICFERNLSY 19


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,914
Number of Sequences: 336
Number of extensions: 1702
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)