Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0374
         (338 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0117 + 13028336-13028404,13029073-13029174,13031108-130313...    26   6.6  
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504...    26   6.6  

>10_07_0117 +
           13028336-13028404,13029073-13029174,13031108-13031367,
           13031813-13031882,13031935-13031966,13032736-13032823,
           13033431-13033742,13033822-13033896,13034018-13034559,
           13034936-13035044,13035713-13035892,13036243-13036404
          Length = 666

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 122 QTCNAKCSSKFLNVIFFFMVICST 193
           QTCN KC +    ++ FF   C T
Sbjct: 112 QTCNKKCRADSETILGFFWTDCPT 135


>03_02_0020 -
           5045900-5046211,5046233-5046290,5046604-5047242,
           5048475-5048515,5048672-5048728,5048952-5049140
          Length = 431

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 159 LRNLLLHFALHV*KQNDARGHCSGGEPPSLY 67
           LR+++LHF  H        GH  GG    LY
Sbjct: 145 LRDVILHFKKHKRDTRGIAGHSKGGNVVILY 175


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,287,924
Number of Sequences: 37544
Number of extensions: 140908
Number of successful extensions: 234
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)