Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0374
         (338 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68298-3|CAA92600.2|  357|Caenorhabditis elegans Hypothetical pr...    30   0.49 
U21324-13|AAA62558.1|  357|Caenorhabditis elegans Hypothetical p...    29   0.64 
Z69383-1|CAA93412.1|  409|Caenorhabditis elegans Hypothetical pr...    27   3.4  
Z49131-1|CAA88974.1|  122|Caenorhabditis elegans Hypothetical pr...    26   6.0  
Z95619-3|CAB54269.1|  490|Caenorhabditis elegans Hypothetical pr...    26   7.9  
Z95619-2|CAB09114.1|  450|Caenorhabditis elegans Hypothetical pr...    26   7.9  

>Z68298-3|CAA92600.2|  357|Caenorhabditis elegans Hypothetical
           protein F44D12.4 protein.
          Length = 357

 Score = 29.9 bits (64), Expect = 0.49
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 15  KEYLFANRLKNS*RSQQCIVKVALPRSNDPARHFVFRRVMQNVA 146
           + Y  A  LK+  R ++CI+++  P+S DP    + R+   ++A
Sbjct: 196 RHYQVARMLKSIRRGEECIIRLIAPKSADPGTMKMTRKTGGDLA 239


>U21324-13|AAA62558.1|  357|Caenorhabditis elegans Hypothetical
           protein C35D10.2 protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 15  KEYLFANRLKNS*RSQQCIVKVALPRSNDP 104
           + Y  A  LKN  R ++C+V++  P++ DP
Sbjct: 196 RHYQVARILKNVRRGEECVVRLIAPKTADP 225


>Z69383-1|CAA93412.1|  409|Caenorhabditis elegans Hypothetical
           protein F13E9.4 protein.
          Length = 409

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 184 YNHKKKNYIKKFTATFCITRLKT 116
           YNH   NY +  TAT   T+ KT
Sbjct: 381 YNHNGNNYFESTTATSAATKKKT 403


>Z49131-1|CAA88974.1|  122|Caenorhabditis elegans Hypothetical
           protein ZC373.2 protein.
          Length = 122

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 293 FISHARRMCVCIFN 334
           FIS+ RR CVC FN
Sbjct: 74  FISNDRRTCVCCFN 87


>Z95619-3|CAB54269.1|  490|Caenorhabditis elegans Hypothetical
           protein H21P03.3b protein.
          Length = 490

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 143 YILHYTSENKMTRGVIAPGESHLHYTLLASLTIF 42
           YILH+ S    + GVI    SH HYT+   L+ F
Sbjct: 356 YILHWLSWLVCSVGVIFLVLSHGHYTIDVILSYF 389


>Z95619-2|CAB09114.1|  450|Caenorhabditis elegans Hypothetical
           protein H21P03.3a protein.
          Length = 450

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 143 YILHYTSENKMTRGVIAPGESHLHYTLLASLTIF 42
           YILH+ S    + GVI    SH HYT+   L+ F
Sbjct: 316 YILHWLSWLVCSVGVIFLVLSHGHYTIDVILSYF 349


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,726,571
Number of Sequences: 27780
Number of extensions: 143122
Number of successful extensions: 324
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)