Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0373
(448 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_12735| Best HMM Match : PT (HMM E-Value=0.36) 29 1.8
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 1.8
SB_5284| Best HMM Match : CHASE3 (HMM E-Value=0.83) 29 2.3
SB_22636| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4) 28 3.1
SB_36189| Best HMM Match : ANATO (HMM E-Value=2.9) 28 3.1
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 28 3.1
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 28 4.0
SB_31201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_57776| Best HMM Match : EB (HMM E-Value=2.9) 27 5.3
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 27 5.3
SB_25713| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 27 7.1
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_14164| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_33022| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_4072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 27 9.3
>SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 35.5 bits (78), Expect = 0.020
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -1
Query: 169 HEPEAHAAQTLQQSQHDNEDDVPIILDAEHRYHEDEHQRRLPAHHHELG 23
H P + + S D DD PI D E EDE + A+HHE G
Sbjct: 28 HGPAGRSLSRKETSGKDGGDDTPIEDDIEEEEIEDEDEGSAKANHHESG 76
>SB_12735| Best HMM Match : PT (HMM E-Value=0.36)
Length = 1148
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 121 DNEDDVPIILDAEHRYHEDEHQRRLP 44
D E+DVP+ D E + +HQR LP
Sbjct: 923 DIEEDVPLWKDNEEKQEAQKHQRSLP 948
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 121 DNEDDVPIILDAEHRYHEDEHQRRLPAHHHELG-DDVREQ 5
DN+ DV + D+ H YH + + HHHE DD E+
Sbjct: 648 DNDGDVNVNDDSRHNYHYTQKSK----HHHEKNIDDSNEK 683
>SB_5284| Best HMM Match : CHASE3 (HMM E-Value=0.83)
Length = 957
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 226 ERTQGQLDRVPL*LASGRYHEPEAHAAQTLQQSQHDNEDDVPIILDAEHRYHED 65
ERT+ +L+ + + + +PEA ++T+ N + P+I D ED
Sbjct: 118 ERTKNELEELGYVMTQRKIEKPEAETSKTITPGHDTNARNTPLIDDRLDVEEED 171
>SB_22636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 28.3 bits (60), Expect = 3.1
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -1
Query: 202 RVPL*LASGRYHE---PEAHAAQTLQQSQHDNEDDVPIILDAEHRYHEDEHQRRLPAHHH 32
++ L L G Y E PE AA HD++DD D + H+D+H HHH
Sbjct: 72 KLTLRLLMGIYMEHGIPEVMAAAD-DDDDHDDDDDDDHDDDHDDDDHDDDH------HHH 124
Query: 31 ELGDD 17
+ DD
Sbjct: 125 DDDDD 129
>SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4)
Length = 177
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 103 PIILDAEHRYHEDEHQRRLPAHHH 32
P L+ H YH+ +HQ HHH
Sbjct: 67 PNCLEMTHLYHDQQHQWNHQHHHH 90
>SB_36189| Best HMM Match : ANATO (HMM E-Value=2.9)
Length = 199
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 222 EPKASWIAFRSSSQAADITNPKHMPHRPCSKV-SMITKTMFPLFLTP 85
+ K +A++ SSQ +NPK C+ + I KT F + LTP
Sbjct: 48 DEKPPKLAYKKSSQPESCSNPKKYEMDECALYPTCILKTAFIISLTP 94
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 85 EHRYHEDEHQRRLPAHHHELGDDVRE 8
+HR H EH RR H G+D +E
Sbjct: 849 KHRKHSREHSRRRHQRKHHKGNDAQE 874
>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 709
Score = 27.9 bits (59), Expect = 4.0
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +1
Query: 121 HADFA-ARSVRHVLRVRDIGRLRARAERDPAGLGFVLPHAAAERGDLAHRRDALDPALRV 297
H FA A V + I RL+ RA R P G ++ R R + P R
Sbjct: 447 HGIFAPASKVTRNGTTQHISRLKPRASRRPPGESTLVTSQPNSRPS---SRPSSRPNSRS 503
Query: 298 PLPAPHPRHELAAVHPDAGLALHGL 372
P P P PR + + + D + H L
Sbjct: 504 PSPTPSPRLDDSEIARDFQIGEHVL 528
>SB_31201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 27.9 bits (59), Expect = 4.0
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 170 ISAACELERNAIQLALGSFYPTLLLSGVIWPIEGMPWILRYVSLCLPLTLATNSLRSILT 349
+S A L RNA++LAL + L+ ++ + WIL +L L L L+ +LR L+
Sbjct: 118 VSIALILSRNAVRLALILSRNAVRLALILSSNALIAWILSRNALRLALILSRKALRLALS 177
>SB_57776| Best HMM Match : EB (HMM E-Value=2.9)
Length = 669
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 94 LDAEHRYHEDEHQRRLPAHHHELGDDVRE 8
LD + ++H+D HQ + HE+ D+ E
Sbjct: 58 LDVDRKFHDDSHQLKYFCPPHEIHFDLSE 86
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 157 AHAAQTLQQSQHDNEDDVPIILDAEHRYHEDEHQRRLPAHHHE 29
A Q QQ QH ++++ P A H+ D+H+ HHH+
Sbjct: 5 ASRRQQQQQHQHQDKNNNPPQPSAHHQCQHDKHR----DHHHD 43
>SB_25713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 121 DNEDDVPIILDAEHRYHEDEHQRRLPAHHHELGD 20
DN+++ II E +ED H L H E+ D
Sbjct: 3 DNKENAEIIYSYETEEYEDRHMSELHRHGEEVQD 36
>SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 189 SSQAADITNPKHMPHRPCSKVSMITKTMFPLFLTPNTDIMKMSTSAVCPHITTNWVTTC 13
S +A D+ K + H P +V M TK + TP D+ +T V + NW T C
Sbjct: 394 SKEAIDVF--KQLTHYPDWQVIM-TKAVRYCGATPCLDVYNTTTDKVRVNFKDNWRTQC 449
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 27.1 bits (57), Expect = 7.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 137 QGLCGMCFGFVISAACE 187
QG+CG C+ F ++ A E
Sbjct: 517 QGICGSCYAFAVAGALE 533
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 178 GRYHEPEAHAAQTLQQSQHDNEDDVPIILDAEHRYHEDEHQRRLPAHHHE 29
G+ HE E A +Q H E++ + A+H + E+E P HHE
Sbjct: 361 GQDHEEEERGAHPPEQ--HHEEEERGVHPPAQH-HEEEERGVHPPEQHHE 407
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -1
Query: 418 ERDPGQXXXXXXXXXXXXEGPAPRQDGPQRVRGEGEGQAEGH 293
+RDP + PAP++ GP++ E +AE H
Sbjct: 1549 KRDPSKYQKLEGETEPDPPKPAPKKKGPKKTPEEKAKEAESH 1590
>SB_14164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/23 (43%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = -1
Query: 187 LASGRYHEP-EAHAAQTLQQSQH 122
+ SG +++P EAH+A+T + S+H
Sbjct: 467 MVSGNHYDPIEAHSAETTKDSRH 489
>SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/54 (22%), Positives = 23/54 (42%)
Frame = -2
Query: 282 IQGIPSMGQITPLSSSVG*NEPKASWIAFRSSSQAADITNPKHMPHRPCSKVSM 121
+Q + GQ+ P+ SW++ ++ + + PH P SK S+
Sbjct: 1037 LQTVTGQGQLNPVHEEADLLYSAGSWVSPGGRFRSFSTASSQSSPHTPSSKSSL 1090
>SB_33022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 113 FVIMLTLLQGLCGMCFGFVISAACELERNAIQLAL 217
F IM L Q + MC F+ A C+ A++L L
Sbjct: 256 FGIMSNLFQFISSMCNPFIYMARCKRYNQALKLLL 290
>SB_4072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1364
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 447 FRIVRVTMRKSAIQANVDTKPMYTSESVKGQPRVRMDRSEF 325
+RIV+ + + I +N P YT ES + Q R + F
Sbjct: 515 YRIVKPIIPEIKISSNTPASPSYTQESQEPQEETRHCKRPF 555
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 124 HDNEDDVPIILDAEHRYHEDEHQRRLPAHHH 32
H + + IIL HR H + H+R HHH
Sbjct: 176 HHHPSTIIIILRHRHRQHYNRHRRH---HHH 203
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,706,367
Number of Sequences: 59808
Number of extensions: 259783
Number of successful extensions: 1151
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 883875528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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