Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0371
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.091
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.091
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +3

Query: 381 LFI*CSFLIF*AVIMHDFNILWYFLYLIFELVVLFFIYEYLSF 509
           LF+ C +  + A I+   ++L+Y + LI  L + +F Y ++ F
Sbjct: 207 LFLPCIYYFYSAFIIFTIHLLFYCV-LIILLCIYYFYYAFILF 248



 Score = 25.4 bits (53), Expect = 0.37
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +3

Query: 384 FI*CSFLIF*AVIMHDFNILWYFLYLIFELVVLFFIYEY-----LSFLLLTHDFFIPVVI 548
           F+ C++  + A I+      +Y+ ++IF + +LF +  Y     L FLL  + F+   +I
Sbjct: 96  FLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFII 155



 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = +3

Query: 375 LDLFI*CSFLIF*AVIMHDFNILWYFLYLIFELVVLFFIYEYLSF 509
           + L   C+F+IF   ++    I +++  LI  L + +F   ++ F
Sbjct: 264 MHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIF 308



 Score = 23.4 bits (48), Expect = 1.5
 Identities = 13/52 (25%), Positives = 29/52 (55%)
 Frame = +3

Query: 393 CSFLIF*AVIMHDFNILWYFLYLIFELVVLFFIYEYLSFLLLTHDFFIPVVI 548
           C+F+IF   ++     +++ ++L+F L + +F   +L FL   + F+   +I
Sbjct: 171 CAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTL-HLLFLPCIYYFYSAFII 221



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +3

Query: 375 LDLFI*CSFLIF*AVIMHDFNILWYFLYLIFELVVLFFIYEYLSFLLLT-HDFFIPVVI 548
           + L   C+F+ F   ++    + ++ L+L+F   + +F   Y +F++ T H  F  V+I
Sbjct: 178 MHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYF---YSAFIIFTIHLLFYCVLI 233


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 447 YFLYLIFELVVLFFIYEYLSFLLLTHDF 530
           Y+LYL+ E   +  IY+    ++L  DF
Sbjct: 59  YWLYLVLEADDMLPIYKNTYLIILFADF 86


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 447 YFLYLIFELVVLFFIYEYLSFLLLTHDF 530
           Y+LYL+ E   +  IY+    ++L  DF
Sbjct: 77  YWLYLVLEADDMLPIYKNTYLIILFADF 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,237
Number of Sequences: 336
Number of extensions: 1546
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)