Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0369
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...   166   9e-42
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...   166   9e-42
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...   165   2e-41
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...   165   2e-41
Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...   153   7e-38
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...   153   7e-38
Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U39666-3|AAA80410.2|  178|Caenorhabditis elegans Hypothetical pr...    28   4.4  

>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score =  166 bits (404), Expect = 9e-42
 Identities = 80/145 (55%), Positives = 94/145 (64%), Gaps = 13/145 (8%)
 Frame = +3

Query: 201 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVF-------------AGAHRLWS 341
           P K +IV  NV  F+ LH+A   GLY     AK  T+VF             AGAHRLWS
Sbjct: 41  PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100

Query: 342 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 521
           H  YK   P+ I LM+ N+IA QN I  W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGW 160

Query: 522 LLVRKHPMVKIAGKSLDMSDIYCNP 596
           LLVRKHP VK  G  LD+SD++ +P
Sbjct: 161 LLVRKHPQVKEHGGKLDLSDLFSDP 185


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score =  166 bits (404), Expect = 9e-42
 Identities = 80/145 (55%), Positives = 94/145 (64%), Gaps = 13/145 (8%)
 Frame = +3

Query: 201 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVF-------------AGAHRLWS 341
           P K +IV  NV  F+ LH+A   GLY     AK  T+VF             AGAHRLWS
Sbjct: 41  PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100

Query: 342 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 521
           H  YK   P+ I LM+ N+IA QN I  W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGW 160

Query: 522 LLVRKHPMVKIAGKSLDMSDIYCNP 596
           LLVRKHP VK  G  LD+SD++ +P
Sbjct: 161 LLVRKHPQVKEHGGKLDLSDLFSDP 185


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score =  165 bits (402), Expect = 2e-41
 Identities = 79/145 (54%), Positives = 91/145 (62%), Gaps = 13/145 (8%)
 Frame = +3

Query: 201 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVF-------------AGAHRLWS 341
           P K +IV  NV  F+ LH A   GLY     AK  T +F             AGAHRLWS
Sbjct: 42  PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101

Query: 342 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 521
           H  YK   P+ I LM+ N+IA QN +  W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 102 HKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGW 161

Query: 522 LLVRKHPMVKIAGKSLDMSDIYCNP 596
           LLVRKHP VK  G  LDMSD+  +P
Sbjct: 162 LLVRKHPQVKEQGAKLDMSDLLSDP 186


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score =  165 bits (402), Expect = 2e-41
 Identities = 79/145 (54%), Positives = 91/145 (62%), Gaps = 13/145 (8%)
 Frame = +3

Query: 201 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVF-------------AGAHRLWS 341
           P K +IV  NV  F+ LH A   GLY     AK  T +F             AGAHRLWS
Sbjct: 42  PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101

Query: 342 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 521
           H  YK   P+ I LM+ N+IA QN +  W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 102 HKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGW 161

Query: 522 LLVRKHPMVKIAGKSLDMSDIYCNP 596
           LLVRKHP VK  G  LDMSD+  +P
Sbjct: 162 LLVRKHPQVKEQGAKLDMSDLLSDP 186


>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score =  153 bits (372), Expect = 7e-38
 Identities = 76/144 (52%), Positives = 89/144 (61%), Gaps = 13/144 (9%)
 Frame = +3

Query: 204 IKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLAT-------------SVFAGAHRLWSH 344
           IK +IV  NV  F  LHI  L GLY     AK AT              V  GAHRLW+H
Sbjct: 34  IKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAH 93

Query: 345 NGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWL 524
             YK  L   + LM+ NSIAFQN I  W RDHR HHK+TDTDADPH+  RG FF+H+GWL
Sbjct: 94  RAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWL 153

Query: 525 LVRKHPMVKIAGKSLDMSDIYCNP 596
           LV+KH  +KI G  LD+SD+Y +P
Sbjct: 154 LVKKHDQLKIQGGKLDLSDLYEDP 177


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score =  153 bits (372), Expect = 7e-38
 Identities = 76/144 (52%), Positives = 89/144 (61%), Gaps = 13/144 (9%)
 Frame = +3

Query: 204 IKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLAT-------------SVFAGAHRLWSH 344
           IK +IV  NV  F  LHI  L GLY     AK AT              V  GAHRLW+H
Sbjct: 34  IKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAH 93

Query: 345 NGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWL 524
             YK  L   + LM+ NSIAFQN I  W RDHR HHK+TDTDADPH+  RG FF+H+GWL
Sbjct: 94  RAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWL 153

Query: 525 LVRKHPMVKIAGKSLDMSDIYCNP 596
           LV+KH  +KI G  LD+SD+Y +P
Sbjct: 154 LVKKHDQLKIQGGKLDLSDLYEDP 177


>Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical
           protein C44F1.5 protein.
          Length = 1109

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 213 KIVVMNVIRFSYLHI-AGLYGLYLCFTSAKLATSVFAGA 326
           K++V  ++    +HI     G+YLC T+ +LA + F  A
Sbjct: 5   KVIVAKLLAIIVVHIWTNFTGIYLCSTADRLARNAFLSA 43


>Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical
           protein C44F1.5 protein.
          Length = 1109

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 213 KIVVMNVIRFSYLHI-AGLYGLYLCFTSAKLATSVFAGA 326
           K++V  ++    +HI     G+YLC T+ +LA + F  A
Sbjct: 5   KVIVAKLLAIIVVHIWTNFTGIYLCSTADRLARNAFLSA 43


>U39666-3|AAA80410.2|  178|Caenorhabditis elegans Hypothetical
           protein K04E7.1 protein.
          Length = 178

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 21/85 (24%), Positives = 33/85 (38%)
 Frame = +1

Query: 247 IYILLVYMDFISVSPQQNWLHRFLLELIVCGLIMVTKSNCPSRSC*WSSTVLLFRTPFSH 426
           ++I  V   +++  P   WL   L+   VCG +           C W   VL     F+H
Sbjct: 62  LHISFVVKGYVTSFPLNTWLVVSLVVTAVCGSM-----------CTWLLLVLCIENAFAH 110

Query: 427 G*EITGYITSIRTLMQTLIMLREVF 501
             +IT Y +    L +  I   + F
Sbjct: 111 RLDITPYRSGCALLFEAFIEWTQAF 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,827,562
Number of Sequences: 27780
Number of extensions: 287117
Number of successful extensions: 650
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)