Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0368
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-4|AAK29922.1| 401|Caenorhabditis elegans Pip kinase pr... 192 1e-49
AF003130-8|AAB54130.2| 611|Caenorhabditis elegans Pip kinase pr... 99 3e-21
Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical pr... 63 1e-10
AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical ... 63 1e-10
AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical... 29 3.1
AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical ... 27 9.4
>AC024798-4|AAK29922.1| 401|Caenorhabditis elegans Pip kinase
protein 2 protein.
Length = 401
Score = 192 bits (468), Expect = 1e-49
Identities = 85/162 (52%), Positives = 118/162 (72%)
Frame = +2
Query: 80 DDSSGKSGAKFYQSYDRLFILKTLTSEEVERMHSFLKHYHPYIVERHGKTLLPQYLGMYR 259
D S+ S +F+ SYD+ F++K++ SE V +HS L++YH Y+VE+ GKTLLPQYLG+YR
Sbjct: 121 DGSAKDSTPRFFISYDKKFVIKSMDSEAVAELHSVLRNYHQYVVEKQGKTLLPQYLGLYR 180
Query: 260 LTVDGIEHYLVATRNVFSNHLNIHRKYDLKGSTVDREASXXXXXXXXPTLKDNDFLKQGV 439
LT++G E YL+ RNVF +H K+DLKGSTV R AS PTLKDNDFL+Q
Sbjct: 181 LTIEGSETYLIVMRNVFGRKYGVHTKFDLKGSTVSRAASDKEKAKDLPTLKDNDFLEQNW 240
Query: 440 RIDIGEAAKEKLLETLTADVEFLTKLHLMDYSLLLGVHECGR 565
++++ A + L+E LT+D E+LT++HLMDYSLL+G+H+C R
Sbjct: 241 KLNLPPEAGKLLIEMLTSDTEWLTRMHLMDYSLLVGIHDCER 282
>AF003130-8|AAB54130.2| 611|Caenorhabditis elegans Pip kinase
protein 1 protein.
Length = 611
Score = 98.7 bits (235), Expect = 3e-21
Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +2
Query: 86 SSGKSGAKFYQSYDRLFILKTLTSEEVERMHSFLKHYHPYIVERHGKTLLPQYLGMYRLT 265
++G SG+ FY S D FI+KT+ +E + + L Y+ + ++ +TLLP++ G++
Sbjct: 178 NAGASGSIFYVSQDDQFIIKTVQHKEADFLQKLLPGYYMNL-NQNPRTLLPKFFGLFCYQ 236
Query: 266 VDGIEHYLVATRNVFSNHLNIHRKYDLKGSTVDREASXXXXXXXXPTLKDNDFL---KQG 436
G L+ N+ + +H KYD+KGST R A+ PTLKD DFL K G
Sbjct: 237 SLGKNIRLLVMNNLLPQTVTMHEKYDMKGSTYKRMANKAERAKPHPTLKDLDFLENHKDG 296
Query: 437 VRIDIGEAAKEKLLETLTADVEFLTKLHLMDYSLLLGVH 553
+ ID A E L+++++ D + +MDYSLL+G+H
Sbjct: 297 IFID--PTALEALMKSISRDCLVMESFKIMDYSLLVGIH 333
>Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical protein
VF11C1L.1 protein.
Length = 1482
Score = 63.3 bits (147), Expect = 1e-10
Identities = 45/164 (27%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Frame = +2
Query: 92 GKSGAKFYQSYDRLFILKTLTSEEVERMHSFLKHYHPYIVERHGK---TLLPQYLGMYRL 262
GKSG+ FY++ D F++K ++ E++ F +Y Y+ + T L + G++R+
Sbjct: 1248 GKSGSFFYRTQDDRFVVKQMSRFEIQSFVKFAPNYFDYLTTSATESKLTTLCKVYGVFRI 1307
Query: 263 ----TVDGIEHYLVATRNVFSNHLNIHRKYDLKGSTVDREASXXXXXXXXPTLKDNDFLK 430
++ ++ +F NH N+ + +DLKGS +R AS L D +F+K
Sbjct: 1308 GYKSKTTTLKVDILVMEYLFYNH-NVSQVWDLKGSLRNRLASTGKSANEM-VLLDENFVK 1365
Query: 431 Q--GVRIDIGEAAKEKLLETLTADVEFLTKLHLMDYSLLLGVHE 556
++ + +K + + ++ D FL+ ++MDYSLL+GV +
Sbjct: 1366 DLWNQQLYVLPHSKAAMNQAISNDSHFLSSQYIMDYSLLVGVDD 1409
>AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical
protein VF11C1L.1 protein.
Length = 1482
Score = 63.3 bits (147), Expect = 1e-10
Identities = 45/164 (27%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Frame = +2
Query: 92 GKSGAKFYQSYDRLFILKTLTSEEVERMHSFLKHYHPYIVERHGK---TLLPQYLGMYRL 262
GKSG+ FY++ D F++K ++ E++ F +Y Y+ + T L + G++R+
Sbjct: 1248 GKSGSFFYRTQDDRFVVKQMSRFEIQSFVKFAPNYFDYLTTSATESKLTTLCKVYGVFRI 1307
Query: 263 ----TVDGIEHYLVATRNVFSNHLNIHRKYDLKGSTVDREASXXXXXXXXPTLKDNDFLK 430
++ ++ +F NH N+ + +DLKGS +R AS L D +F+K
Sbjct: 1308 GYKSKTTTLKVDILVMEYLFYNH-NVSQVWDLKGSLRNRLASTGKSANEM-VLLDENFVK 1365
Query: 431 Q--GVRIDIGEAAKEKLLETLTADVEFLTKLHLMDYSLLLGVHE 556
++ + +K + + ++ D FL+ ++MDYSLL+GV +
Sbjct: 1366 DLWNQQLYVLPHSKAAMNQAISNDSHFLSSQYIMDYSLLVGVDD 1409
>AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical
protein Y48B6A.11 protein.
Length = 922
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 302 SW*RPGNALFRRRSVGTCPSTAGAGSCRASPR 207
+W ALF RR++ CP+ GA SPR
Sbjct: 662 TWAHVACALFNRRAIFDCPNRPGACFVEPSPR 693
>AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical
protein Y17G9B.1 protein.
Length = 480
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 311 RTRSW*RPGNALFRRRSVGTCPSTAGAGSCRASPRCMDDSASETN 177
RT + P +++F + PS+A AG+ R++PR +++ N
Sbjct: 78 RTLARPNPNSSIFSKILAQGSPSSAKAGTTRSTPRTSKPPSADEN 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,066,794
Number of Sequences: 27780
Number of extensions: 229345
Number of successful extensions: 734
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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