Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0366
(545 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 90 1e-18
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 87 1e-17
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 83 1e-16
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 81 6e-16
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 77 7e-15
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 77 1e-14
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 71 6e-13
03_06_0310 - 33045991-33046127,33046617-33046818 32 0.34
12_02_0715 - 22453747-22453935,22454347-22454457,22454514-224545... 28 4.2
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 28 4.2
11_01_0626 - 5044385-5045416,5045463-5045471 28 5.6
>03_06_0253 - 32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 89.8 bits (213), Expect = 1e-18
Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Frame = +1
Query: 139 GGIEMGQGINTKAAQVCAYALGIK--------LEKISVKPSSSFTSPNNMVTGGSIGSEC 294
GG+E+GQG+ TK Q+ A+ALG ++K+ V + + + TGGS SE
Sbjct: 1065 GGVEIGQGLWTKVKQMTAFALGQLCDDGGEGLIDKVRVIQADTLSMIQGGFTGGSTTSET 1124
Query: 295 VSFAVMKACNELNKRLAPIKEKLSNPSWEELIVEANTAGINLQVASAFSPVTDGVKPYDV 474
AV K+C L +RL PIKEK P W+ LI +A+ A + L + ++P Y
Sbjct: 1125 SCEAVRKSCAALVERLKPIKEKAGTPPWKSLIAQASMASVKLTEHAYWTP-DPTFTSYLN 1183
Query: 475 YAVGIIEVEVDILTGNHEVLRVD 543
Y I EVEVD+LTG +LR D
Sbjct: 1184 YGAAISEVEVDVLTGETTILRSD 1206
>03_06_0252 - 32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 86.6 bits (205), Expect = 1e-17
Identities = 55/143 (38%), Positives = 76/143 (53%), Gaps = 8/143 (5%)
Frame = +1
Query: 139 GGIEMGQGINTKAAQVCAYALGIK--------LEKISVKPSSSFTSPNNMVTGGSIGSEC 294
GG+E+GQG+ TK Q+ A+ALG L+K+ V + + + TGGS SE
Sbjct: 1066 GGVEIGQGLWTKVKQMTAFALGQLCDDGGEGLLDKVRVIQADTLSMIQGGFTGGSTTSET 1125
Query: 295 VSFAVMKACNELNKRLAPIKEKLSNPSWEELIVEANTAGINLQVASAFSPVTDGVKPYDV 474
AV K+C L +RL PIKEK W+ LI +A+ A + L + ++P Y
Sbjct: 1126 SCEAVRKSCAALVERLKPIKEKAGTLPWKSLIAQASMASVKLTEHAYWTP-DPTFTSYLN 1184
Query: 475 YAVGIIEVEVDILTGNHEVLRVD 543
Y I EVEVD+LTG +LR D
Sbjct: 1185 YGAAISEVEVDVLTGETTILRSD 1207
>07_01_1146 + 10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 83.0 bits (196), Expect = 1e-16
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Frame = +1
Query: 139 GGIEMGQGINTKAAQVCAYALGI--------KLEKISVKPSSSFTSPNNMVTGGSIGSEC 294
GG+E+GQG+ TK Q+ A+ALG L++I V S + +T GS SE
Sbjct: 1063 GGVELGQGLWTKVQQMTAFALGQLWPKGCEGLLDRIRVLQSDTLNLIQGGLTAGSTTSES 1122
Query: 295 VSFAVMKACNELNKRLAPIKEKL----SNPSWEELIVEANTAGINLQVASAFSPVTDGVK 462
A ++ACN L +RL P+ E+L SW+ LI +A+ INL ++ + P D
Sbjct: 1123 SCAATLQACNMLIERLKPVMERLQLQSDTVSWDTLISQASQENINLSASAYWVPEQDS-N 1181
Query: 463 PYDVYAVGIIEVEVDILTGNHEVLRVD 543
Y Y G EVEVD+LTG ++R D
Sbjct: 1182 FYLNYGAGTSEVEVDLLTGAITIIRSD 1208
>07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 81.0 bits (191), Expect = 6e-16
Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Frame = +1
Query: 139 GGIEMGQGINTKAAQVCAYALGIK--------LEKISVKPSSSFTSPNNMVTGGSIGSEC 294
GGIE+GQG+ TK Q+ A+ LG LE++ + + + + T GS SE
Sbjct: 1120 GGIELGQGLWTKVKQMAAFGLGQLWTDRRQELLERVRIIQADTLSVIQGGWTTGSTTSES 1179
Query: 295 VSFAVMKACNELNKRLAPIKEKLSNP----SWEELIVEANTAGINLQVASAFSPVTDGVK 462
AV +ACN L RL P+KE+L SW+ELI +A G++L + P G
Sbjct: 1180 SCEAVHRACNILVDRLKPLKEQLQEKQGTVSWDELISQAKMVGVDLSAKELYVPGASG-- 1237
Query: 463 PYDVYAVGIIEVEVDILTGNHEVLRVD 543
Y Y EVE+D+LTG +LR D
Sbjct: 1238 SYLNYGAAASEVEIDLLTGATTILRSD 1264
>10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 77.4 bits (182), Expect = 7e-15
Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Frame = +1
Query: 139 GGIEMGQGINTKAAQVCAYALGIK--------LEKISVKPSSSFTSPNNMVTGGSIGSEC 294
GG+E+GQG+ TK Q+ A+ALG L+ + V + + + T GS SE
Sbjct: 1061 GGVEIGQGLWTKVKQMTAFALGQLCDDGGEGLLDNVRVIQADTLSMIQGGWTAGSTTSET 1120
Query: 295 VSFAVMKACNELNKRLAPIKEKLSNPSWEELIVEANTAGINLQVASAFSPVTDGVKPYDV 474
AV K+C L +RL PIKEK W+ I +A+ A + L + ++P Y
Sbjct: 1121 SCEAVRKSCAALVERLKPIKEKAGTLPWKSFIAQASMASVKLTEHAYWTP-DPTFTSYMN 1179
Query: 475 YAVGIIEVEVDILTGNHEVLRVD 543
Y EVEVD+LTG +LR D
Sbjct: 1180 YGAATSEVEVDVLTGATTILRSD 1202
>03_04_0157 + 17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 76.6 bits (180), Expect = 1e-14
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Frame = +1
Query: 139 GGIEMGQGINTKAAQVCAYALGIKLEKISVKPSSSFTSPNNMVTGGSIGSECVSFAVMKA 318
GG+EMGQG++TK AQV A + I L I + +S+ PN T S S+ AV+ A
Sbjct: 1086 GGVEMGQGLHTKVAQVAASSFNIPLSSIFISETSTDKVPNATPTAASASSDLYGAAVLDA 1145
Query: 319 CNELNKRLAPIKEKLSNPSWEELI-------VEANTAGINLQVASAFSPVTDGVKP--YD 471
C ++ R+ P+ + ++ S+ EL+ ++ + G + F V+ P Y
Sbjct: 1146 CQQIMARMEPVASRGNHKSFAELVLACYLERIDLSAHGFYITPDVGFDWVSGKGTPFYYF 1205
Query: 472 VYAVGIIEVEVDILTGNHEVLRVD 543
Y EVE+D LTG+ VD
Sbjct: 1206 TYGAAFAEVEIDTLTGDFHTRTVD 1229
Score = 35.5 bits (78), Expect = 0.028
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 18 NRWRKR*INLLPLSSNITCVGLF----NCIISVYHGDGTVVITHGWYRNG 155
NRWRKR I ++P I+ F ++ VY DGTV++THG G
Sbjct: 1043 NRWRKRGIAMVPTKFGISFTTKFMNQAGALVQVY-TDGTVLVTHGGVEMG 1091
>07_01_1149 + 10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 70.9 bits (166), Expect = 6e-13
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Frame = +1
Query: 139 GGIEMGQGINTKAAQVCAYALGI--------KLEKISVKPSSSFTSPNNMVTGGSIGSEC 294
GGIE+GQG+ TK Q+ YALG L++I V S + VT GS SE
Sbjct: 1015 GGIELGQGLWTKVQQMAVYALGQLWPNGCEGLLDRIRVLQSDTLNLIQGGVTAGSTTSES 1074
Query: 295 VSFAVMKACNELNKRLAPIKEKLSNP----SWEELIVEANTAGINLQVASAFSPVTDGVK 462
A ++ACN L +RL P+ ++L SW+ LI +A+ +NL ++ + P D K
Sbjct: 1075 SCAATLQACNMLVERLKPVLDRLQLQSGIVSWDTLISQASQENVNLSASAYWVPDQDS-K 1133
Query: 463 PYDVYAVGIIEVEVDILTG 519
Y Y G E+E + G
Sbjct: 1134 FYLNYGAGTSEIEGSFIQG 1152
>03_06_0310 - 33045991-33046127,33046617-33046818
Length = 112
Score = 31.9 bits (69), Expect = 0.34
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 130 SPTGGIEMGQGINTKAAQVCAYALG 204
S GG E+GQG+ TK Q+ A+ALG
Sbjct: 5 SIAGGFEIGQGLWTKVKQMTAFALG 29
>12_02_0715 -
22453747-22453935,22454347-22454457,22454514-22454572,
22454893-22455067,22455255-22455307,22455670-22455739,
22457044-22457218,22457639-22457703,22458196-22460826
Length = 1175
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 373 SWEELIVEANTAGINLQVASAFSPVT-DGVKPYDVYAVGII 492
SW +I + G L+ F + +G+KP DV +G++
Sbjct: 615 SWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVL 655
>01_07_0290 -
42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +1
Query: 139 GGIEMGQGINTKAAQVCAYALGIKLEKISVKPSSSFTSPNNMVTGGSIGSECVSFAVMKA 318
GG G G +T +Q A K++ + + SSSF+S ++T G + V+
Sbjct: 293 GGTTKGHGDDTFTSQPTAMQWKQKMKTLFISKSSSFSS-RGVIT----GDPYIGLNVVGV 347
Query: 319 CNELNKRLAPIKEKLSNPSWEEL 387
E+ KR++ ++EK+++ + +L
Sbjct: 348 PEEVAKRMS-VEEKVTDHNIAQL 369
>11_01_0626 - 5044385-5045416,5045463-5045471
Length = 346
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 232 PSSSFTSPNNMVTGGSIGSECVSFAVMKACNELNKRL 342
P+SSF P +V GG+ CVS A C L RL
Sbjct: 165 PTSSFIRPAPLVVGGAAYWLCVSNAADLGCYVLALRL 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,350,565
Number of Sequences: 37544
Number of extensions: 283905
Number of successful extensions: 625
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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