Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0366
         (545 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr...    91   6e-19
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...    83   2e-16
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...    76   2e-14
Z14092-11|CAI46627.1|  817|Caenorhabditis elegans Hypothetical p...    29   2.2  
Z14092-5|CAD45600.1|  816|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z14092-4|CAD45599.1|  820|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z14092-3|CAA78473.3|  754|Caenorhabditis elegans Hypothetical pr...    29   2.2  

>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical protein
            F55B11.1 protein.
          Length = 1358

 Score = 90.6 bits (215), Expect = 6e-19
 Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
 Frame = +1

Query: 139  GGIEMGQGINTKAAQVCAYALGIKLEKISVKPSSSFTSPNNMVTGGSIGSECVSFAVMKA 318
            GG+EMGQG++TK  Q+ A  L I +E+I +  +S+   PN   T  S+GS+    AV  A
Sbjct: 1061 GGMEMGQGLHTKILQIAARCLEIPIERIHIHDTSTDKVPNASATAASVGSDMNGLAVQDA 1120

Query: 319  CNELNKRLAPIKEKLSNPSWEELIVEANTAGINLQVASAF-----SPVT----DGVK--P 465
            C ++N+RL   K+   N +W++ +  A    ++L  AS F      PV      G +   
Sbjct: 1121 CRQINERLERFKKLDPNGTWDDWVKAAYVDRVSLS-ASGFGIIHHEPVDFFNGKGAELFG 1179

Query: 466  YDVYAVGIIEVEVDILTGNHEVLRVD 543
            Y VY     EVE+D LTG+H +LR D
Sbjct: 1180 YSVYGTACCEVEIDCLTGDHHLLRTD 1205


>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
            protein B0222.9 protein.
          Length = 1217

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
 Frame = +1

Query: 139  GGIEMGQGINTKAAQVCAYALGIKLEKISVKPSSSFTSPNNMVTGGSIGSECVSFAVMKA 318
            GG EMGQG+N K  QVC+ AL   ++ I++   S+    N   TGGS  ++    AV+  
Sbjct: 943  GGTEMGQGLNQKMLQVCSEALKRPIDTITIVDCSTDKVTNAPETGGSQNADTNGLAVLAC 1002

Query: 319  CNELNKRLAPIKEKLSNPSWEELIVEANTAGINLQ------VASAFSPVTDGVKPYDVYA 480
            C ++  RL PI +K ++  WE+ I EA  A + LQ      V  A   V +   PY+   
Sbjct: 1003 CKKIMSRLQPIIDK-NDGEWEKSIREAYGAYVPLQCTEYGTVERAKFGVGEMESPYNTTG 1061

Query: 481  VGIIEVEVDILTGNHEVLRVD 543
               +E+E+D LTG + V+RVD
Sbjct: 1062 ACAVEMEIDTLTGYNRVIRVD 1082


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
            protein F15E6.6 protein.
          Length = 1228

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
 Frame = +1

Query: 139  GGIEMGQGINTKAAQVCAYALGIKLEKISVKPSSSFTSPNNMVTGGSIGSECVSFAVMKA 318
            GG EMGQG+N K  QVC+ AL   ++ I++   S+    N   TG S  ++    AV+  
Sbjct: 953  GGTEMGQGLNQKMLQVCSEALKRPIDTITIVDCSTDKITNAPETGASHNADTNGLAVLAC 1012

Query: 319  CNELNKRLAPIKEKLSNPSWEELIVEANTAGINLQVASAFS------PVTDGVKPYDVYA 480
            C  +  RL PI +K ++  WE+ I +A  A + LQ     S       + +   PY+   
Sbjct: 1013 CERIMSRLQPIIDK-NDGDWEKSIRDAYGAYVPLQCTEYGSVDREKLSIGEFEYPYNTTG 1071

Query: 481  VGIIEVEVDILTGNHEVLRVD 543
               +E+EVD +TG + +LRVD
Sbjct: 1072 ACAVEMEVDTMTGYNRLLRVD 1092


>Z14092-11|CAI46627.1|  817|Caenorhabditis elegans Hypothetical
           protein R107.4d protein.
          Length = 817

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
 Frame = +1

Query: 139 GGIEMGQGINTKAA--QVCAYALGIKLEKIS-VKPSSS----FTSPNNMVTGGSIGSECV 297
           G  E G+ +  K A  ++   A+GI++E +  +K +S+    F S +  +  GS+ SE +
Sbjct: 38  GRTESGRLVAVKTACKKLEVAAIGIEIEILKKLKGASNIVQYFGSNHTKMAPGSVTSETI 97

Query: 298 SFAVMKACNELNKRLAPIKEK--LSNPSWEELIVEANTA 408
           SFA+  A + L   +   K    LS+ +  +L+V+ + A
Sbjct: 98  SFAMEYASSSLEAEMRRPKNHRGLSSNALIDLVVDCSMA 136


>Z14092-5|CAD45600.1|  816|Caenorhabditis elegans Hypothetical
           protein R107.4c protein.
          Length = 816

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
 Frame = +1

Query: 139 GGIEMGQGINTKAA--QVCAYALGIKLEKIS-VKPSSS----FTSPNNMVTGGSIGSECV 297
           G  E G+ +  K A  ++   A+GI++E +  +K +S+    F S +  +  GS+ SE +
Sbjct: 38  GRTESGRLVAVKTACKKLEVAAIGIEIEILKKLKGASNIVQYFGSNHTKMAPGSVTSETI 97

Query: 298 SFAVMKACNELNKRLAPIKEK--LSNPSWEELIVEANTA 408
           SFA+  A + L   +   K    LS+ +  +L+V+ + A
Sbjct: 98  SFAMEYASSSLEAEMRRPKNHRGLSSNALIDLVVDCSMA 136


>Z14092-4|CAD45599.1|  820|Caenorhabditis elegans Hypothetical
           protein R107.4b protein.
          Length = 820

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
 Frame = +1

Query: 139 GGIEMGQGINTKAA--QVCAYALGIKLEKIS-VKPSSS----FTSPNNMVTGGSIGSECV 297
           G  E G+ +  K A  ++   A+GI++E +  +K +S+    F S +  +  GS+ SE +
Sbjct: 38  GRTESGRLVAVKTACKKLEVAAIGIEIEILKKLKGASNIVQYFGSNHTKMAPGSVTSETI 97

Query: 298 SFAVMKACNELNKRLAPIKEK--LSNPSWEELIVEANTA 408
           SFA+  A + L   +   K    LS+ +  +L+V+ + A
Sbjct: 98  SFAMEYASSSLEAEMRRPKNHRGLSSNALIDLVVDCSMA 136


>Z14092-3|CAA78473.3|  754|Caenorhabditis elegans Hypothetical
           protein R107.4a protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
 Frame = +1

Query: 139 GGIEMGQGINTKAA--QVCAYALGIKLEKIS-VKPSSS----FTSPNNMVTGGSIGSECV 297
           G  E G+ +  K A  ++   A+GI++E +  +K +S+    F S +  +  GS+ SE +
Sbjct: 38  GRTESGRLVAVKTACKKLEVAAIGIEIEILKKLKGASNIVQYFGSNHTKMAPGSVTSETI 97

Query: 298 SFAVMKACNELNKRLAPIKEK--LSNPSWEELIVEANTA 408
           SFA+  A + L   +   K    LS+ +  +L+V+ + A
Sbjct: 98  SFAMEYASSSLEAEMRRPKNHRGLSSNALIDLVVDCSMA 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,982,412
Number of Sequences: 27780
Number of extensions: 236597
Number of successful extensions: 631
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)