Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0366
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    25   0.50 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.50 
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   3.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.7  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   6.2  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   6.2  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   8.2  

>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 334 CLIHYTPS*LRMKRIRCQYCHRLPYC 257
           C  +   S LR+ R RCQYC RL  C
Sbjct: 55  CTKNQQCSILRINRNRCQYC-RLKKC 79


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 334 CLIHYTPS*LRMKRIRCQYCHRLPYC 257
           C  +   S LR+ R RCQYC RL  C
Sbjct: 104 CTKNQQCSILRINRNRCQYC-RLKKC 128


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 278 LPPVTILLGEVKLELGFTLIFSN 210
           LPPVT   GE  L++    I+SN
Sbjct: 44  LPPVTPPQGENMLDMDLRGIYSN 66


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 438 FTCDGWG 458
           F CDGWG
Sbjct: 609 FACDGWG 615


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 438 FTCDGWG 458
           F CDGWG
Sbjct: 647 FACDGWG 653


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 78  GLFNCIISVYHGDGTVVITHGW 143
           GL NC+  ++  DG   +  G+
Sbjct: 158 GLGNCLTKIFKADGITGLYRGF 179


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 78  GLFNCIISVYHGDGTVVITHGW 143
           GL NC+  ++  DG   +  G+
Sbjct: 158 GLGNCLTKIFKADGITGLYRGF 179


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 400 NTAGINLQVASAFSPVTDGVKPYDVYAVGI 489
           N A IN+ V      V D  K +D+  +G+
Sbjct: 90  NNATINIDVTLQNDEVLDWKKIFDINLLGL 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,658
Number of Sequences: 438
Number of extensions: 2845
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)